Luteibacter rhizovicinus DSM 16549: BJI69_07315
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Entry
BJI69_07315 CDS
T04563
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lrz
Luteibacter rhizovicinus DSM 16549
Brite
KEGG Orthology (KO) [BR:
lrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrz03016
]
BJI69_07315
Enzymes [BR:
lrz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BJI69_07315
Transfer RNA biogenesis [BR:
lrz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BJI69_07315
Prokaryotic type
tRNA splicing ligases
BJI69_07315
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
APG03736
UniProt:
A0A0G9HAR1
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All DBs
Position
1620666..1621886
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AA seq
406 aa
AA seq
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MSTTAYEVINEPGAAPIKLWTRGVPLEAEARQQLINIAKLPFIHGWLAVMPDVHLGKGAT
VGSVVPTIGAIVPAAVGVDIGCGMIATRTTLTASDLPDDLRDLRHAIEAAVPHGRTVGKR
DKGAWATPPKATEDGWHELVAEFALITAKYPKLARTNNLHHLGTLGTGNHFVEICLDEEQ
RVWFMLHSGSRGVGNAIGNHFIELAKQDMRRWMINLPDQDLAYLPEGSEHFGDYVFAVDW
AQRFARTNRAIMMRHVIEAARKIIAKPFDAWSEAVNCHHNYVSREKHLGKDVLVTRKGAV
SARKGELGIIPGSMGAKSFIVRGLGNEESFNSCSHGAGRVMSRTQAKKQITLEEHRKATA
HVECRKDADVIDESPAAYKSIEAVMAAQEDLVEIVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaccgcttacgaagtcatcaacgagccgggtgccgcaccgatcaagctgtgg
acccgcggtgtgccgctggaagccgaagcacgccagcagctgatcaacattgcgaagctg
cccttcatccatggctggctggccgtgatgcccgacgtccacctgggcaagggcgccacg
gtcggctcggtggtgccgaccatcggtgcgatcgtcccggcggccgtcggcgtcgatatc
ggttgcggcatgatcgctacgcggacgacgctgaccgcgtcggatctgccggacgacctg
cgcgatctgcgccatgcgatcgaggcggcggtaccgcacggccgtacagtgggaaagcgc
gataaaggcgcctgggccacgccaccgaaagccacggaggatggctggcacgaactggtc
gcggaatttgcgctgatcacggcgaagtatccgaagctggcacgcaccaacaacctgcac
cacctcggtacgctcggcacgggcaaccatttcgtcgagatctgtctcgacgaggagcag
cgcgtgtggttcatgctgcactccggctcccgtggcgtgggcaatgccattggcaaccac
tttatcgagctcgccaagcaggacatgcgccgctggatgatcaacctgcccgaccaggat
ctggcgtacctgccggagggcagcgagcatttcggcgactacgtgttcgccgtggactgg
gcgcagcgttttgcgcggacgaaccgggccatcatgatgcgtcacgtgatcgaggcggcg
cgcaagatcatcgccaagccgttcgacgcgtggtcggaggcggtgaactgccaccacaac
tacgtgagccgcgagaagcacctgggcaaggacgtcctggttacccgtaagggggcggtg
agtgcgaggaagggtgagctcggcatcatcccgggaagcatgggagcgaagagcttcatc
gtgcgtggcctcggtaacgaggaaagtttcaacagctgcagccacggcgccgggcgtgtg
atgagccgcacccaggcgaagaagcagatcacgctcgaggaacaccgcaaggcgacggcg
catgtcgagtgccgcaaggatgccgatgtgatcgacgagtcgccggcggcgtacaagtcc
atcgaagccgtgatggcggcgcaagaggatctcgttgaaatcgtccacactttgcgccag
gtcgtctgtgtgaagggttga
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