Latilactobacillus sakei subsp. sakei: LCA_1495
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Entry
LCA_1495 CDS
T00299
Symbol
rfbB
Name
(GenBank) Putative dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa00521
Streptomycin biosynthesis
lsa00541
O-Antigen nucleotide sugar biosynthesis
lsa01100
Metabolic pathways
lsa01110
Biosynthesis of secondary metabolites
lsa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LCA_1495 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCA_1495 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LCA_1495 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCA_1495 (rfbB)
00525 Acarbose and validamycin biosynthesis
LCA_1495 (rfbB)
Enzymes [BR:
lsa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LCA_1495 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
CAI55797
UniProt:
Q38VI6
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Position
complement(1467578..1468582)
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AA seq
334 aa
AA seq
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MIRHILVTGGAGFIGSNFVRYVVRQQPEVHVTVLDKLTYAGNRANLAGLPAERVTLVVGD
ICDAPLVQQLVQKVDAVVHYAAESHNDNSLQDPTPFIQTNIMGSYTLIEACRQYHVRYHH
VSTGEVYGDLPLVGDAKFTPETRYNPSSPYSASKASSDLLVRAWVRSFGLRATISNCSNN
YGPYQHIEKFIPRQITNILSGRRPKLYGTGQNIRDWIHTDDHSSAVWTILTRGRIGETYL
IGADGQRTNQAVLEMILTLMGQPKDAYDQVQDRPGRDLRYAIDATKLREELGWQPQLTDF
KVGLQQTIDWYRHHEEWWQADKAKVEARYARNKQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtcatattcttgtaaccggtggtgccggttttatcggttctaattttgttcgc
tatgtggtccggcaacagccagaagtccatgtaacggttttggataagttaacgtacgct
ggtaatcgggctaatttagccggcttaccagcagaacgagtgacgttggtagtcggtgat
atttgtgatgcaccattggttcagcagttagtccaaaaggtggatgcggtggtacattat
gcagctgaaagtcataatgataattcgctgcaggatccaacaccttttattcaaactaat
attatgggttcctatacgctaattgaagcctgtcgacaatatcatgtgcggtatcatcac
gtttctacaggtgaagtttacggcgatttaccgttagtaggtgatgcaaaatttacaccc
gaaacacgttataatcctagtagcccgtactccgcttccaaggcgagttctgatttgtta
gtacgggcgtgggtgcgctcatttgggctacgcgcaacgatatccaattgttccaataat
tatgggccgtatcaacatattgaaaagtttatcccgcgtcagattaccaatattttaagt
ggtaggcgccctaagttatatggcactggccaaaatattcgtgattggattcatacggat
gaccactctagcgctgtttggacaatattgacacgtggccgaattggcgagacctatttg
attggtgctgatgggcaacgcacgaatcaagctgttttggaaatgattttaacattgatg
gggcaacccaaggatgcatatgatcaagttcaggatcgaccagggcgtgatttgcggtac
gccattgacgcgaccaagcttcgtgaagaacttggatggcaaccgcaattaaccgatttt
aaagttgggttacagcagacaatcgattggtatcggcaccatgaggaatggtggcaagca
gataaagctaaggtagaagcgagatacgcgcgtaataaacaatga
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