KEGG   Litorilituus sediminis: EMK97_04950Help
Entry
EMK97_04950       CDS       T05852                                 

Gene name
mrdA
Definition
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
lsd  Litorilituus sediminis
Pathway
lsd00550  Peptidoglycan biosynthesis
lsd01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:lsd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    EMK97_04950 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    EMK97_04950 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lsd01011]
    EMK97_04950 (mrdA)
Enzymes [BR:lsd01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     EMK97_04950 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:lsd01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   EMK97_04950 (mrdA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Transpeptidase PBP_dimer
Motif
Other DBs
NCBI-ProteinID: QBG35112
LinkDB All DBs
Position
1097214..1099187
Genome map
AA seq 657 aa AA seqDB search
MPPRRVIIRNQSAEANLFARRTFIAFSGVVVLLIILFANVFSLQVSSYEKYQTRSNSNRI
KLLPVAPNRGLIYDRNGVILADNKPVYSLEIIPEDVKDIEKSVKEVSELLGISQERQAKF
FKAVKGKRRFKPVELHTRLSDQQVALFSVNKHKYPGIFVDARLKRYYPFADLTTHNLGYV
ARINRRDANKLEQQGKAENYAATYGIGKLGIEKYYEDILHGTIGHQEVEINNQGRIVRTL
DYTPPIPGKDLTLSLDIELQMIAKRALTGKRGAIVAMDPRSGEVLAMYSNPSYDGNLFVH
GISSKNYNKLRNSNDSPFLNRSLRGYPPASTVKPFLALTGLEEDIVTPETKIWDPGWYQL
EGLPNKYRDWRKWGHGWVDLTTAIEQSCNIYFFDLAFKLGITKISTMMENFGFGESTGID
IHEEATGIMPSVSWKRGRYNQPWYTGETLSVGIGQSYWTATPLQLTQALTTLVNKGERKV
PHLLKATSYLDTSDTEQLTPIVEQISYEPQAPIKLKNERHWDIVLDAMHSTVQKVGATGH
VAFKGTKYDAAGKTGSAQVARIKQDEKYDAEKTAENKRDNAMFIAFAPFEKPEIVVAVAI
ENVAKGGGGTNAGPVARQIMDQYFGDRVITSSNNNKLPQQSLAHNHSHGSNLVRESD
NT seq 1974 nt NT seq  +upstreamnt  +downstreamnt
gtgcctcctcgtcgcgtcattattcgaaaccaaagtgcagaagcaaacctctttgctcgc
cgtacttttattgctttttcaggcgtagttgttttactcattatcttatttgccaatgtc
ttttctctacaggtttcttcctatgagaaatatcaaacccgttcaaattcaaatcgcatt
aagttattaccggtcgcccctaaccgcggcctgatatatgatagaaatggcgttattttg
gctgataataagccagtatatagcttagaaattattcctgaagatgttaaagatatagag
aaaagcgttaaagaagtcagtgaattacttggtattagtcaggaaaggcaagcaaaattc
tttaaagcagtcaaaggtaaacgtcgttttaagccggttgagctacacacgcgtttaagc
gatcaacaagtcgcgctattttcagtaaataagcataaatatccgggtatctttgttgat
gctcgcttaaaacgttattacccttttgctgatttaactacccataacctaggttatgta
gcccgaataaaccgtcgtgatgctaataagttagagcaacaaggtaaggctgaaaactat
gccgccacttatggcataggtaaattaggtattgaaaaatactacgaagatattctacac
ggcaccataggccatcaagaggtcgagattaacaaccaaggccgtattgtgcgcacttta
gattacacgccgcccattccaggtaaagatttaactttaagcttagatattgagttgcaa
atgatcgctaaacgcgcactgacaggtaagcgcggcgctattgttgctatggatcctcgc
agtggcgaggtattagccatgtattcaaacccaagctacgatggtaatttatttgtccat
ggtatcagtagtaaaaattataataagttacgtaattctaatgactctccgtttcttaac
cgaagtttgcgaggttacccgcccgcttccaccgttaagcctttcttagcgcttaccggc
ttagaagaagacattgttacccctgaaaccaaaatttgggatccaggctggtatcagcta
gaaggcttacccaataaataccgtgattggcggaaatgggggcacggctgggttgattta
accacggcaattgagcaatcctgtaatatctacttttttgatttggcctttaaacttggc
atcaccaaaataagtaccatgatggaaaacttcggctttggtgaaagcacaggcattgat
attcatgaagaagctacaggcataatgcccagtgtaagttggaagcgtggcagatataac
cagccttggtatacaggtgaaacactatcagtgggtatagggcaaagttactggacagca
acaccattacagttaacgcaggcactaaccaccttagttaataaaggcgagcgaaaagta
ccgcatttactcaaagcgacttcgtatttagataccagtgataccgagcaattaactcca
atcgttgagcagataagctacgagccgcaagcgccaattaagcttaaaaatgaacggcat
tgggatattgtacttgatgccatgcacagcacagtgcaaaaagtgggtgcaaccggtcat
gtcgcctttaaaggtacaaagtatgatgctgctggtaaaaccggatcggcgcaagttgcg
agaatcaagcaagatgaaaaatatgatgccgagaagaccgccgagaataagcgtgataat
gccatgtttattgcctttgccccttttgaaaagcccgaaattgttgtcgcggttgccatt
gaaaatgtagctaaaggtggcggaggtaccaatgctggtcctgttgccagacaaattatg
gatcagtattttggtgatagagtcatcacctcaagtaacaataataagcttcctcaacag
agcttagctcataatcacagccacggttccaatttagtacgagagagcgattaa

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