Leifsonia shinshuensis: F1C12_02620
Help
Entry
F1C12_02620 CDS
T06806
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
lse
Leifsonia shinshuensis
Pathway
lse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1C12_02620 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lse03400
]
F1C12_02620 (uvrC)
DNA repair and recombination proteins [BR:
lse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1C12_02620 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
HHH_2
UVR
HHH
GIY_YIG_2
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
QNE34132
UniProt:
A0A7G6Y6L7
LinkDB
All DBs
Position
537988..539985
Genome browser
AA seq
665 aa
AA seq
DB search
MQSTDTVGYRPKAGEIPTQPGVYRFRDKNRRVLYVGKAKNLRARLSNYFQPLRSLHERTR
RMVTTAASVEWTVVASEFEALQLEYTWIKEFNPPFNVQFRDDKSYPYLAVTLGERIPRVM
VTRNRNLKDARYFGPYTKVWAIRDTVDLMLKAFPVRSCSDGVYRRAELTGRPCLLGDIGK
CAAPCVGRISPEDHRELAEDFVSFMAGNDTKYIRDLTEKMKQAASTLDYEAAARHRDAIG
ALEAAMGKSAVVLQDNVDLDAFGIAQDELAAAVQQFIVRGGRIRGVRSWVVDKELDISLG
ELVETVLQNAYEGADAPPREIIVPELPEDATELEQWLMARRVEADEAGPVRRGPKSTGRV
ELRVAQRGDKAALAQTAEMNAKNALILYKTRRSSDFVARSKALNDIQDALGMADAPLRME
CFDVSHLSGTNIVASMVVFEDGLPRKDQYRRFSIPESTDDTESIYQVISRRLAYLKDDGA
GEQDEAVEAPDPDDQGRDGDDPEIDVDAEIAEAAERRRRKFSYPPNLLIVDGGQPQVAAA
QRALDESGVTGIQLAGIAKRLEELWLPDSDFPVILPRNSDALFLVQRIRDEAHRFAITYQ
RARRKRDISSVLGEIPGLGPARVKELLKHFGSVAQLRQATPEQIAEVRGVGPAIAAAVHE
RLAAG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagtacggacacggtcggctaccgccccaaggccggcgagatcccgacgcagccc
ggcgtctaccggttccgcgacaagaaccggcgggtgctgtacgtcggcaaggcgaagaac
ctccgcgcgcggctgagcaactacttccagccgctgcggagcctccacgagcgcacccgc
cgcatggtgaccacggcggcgagcgtcgagtggacggtcgtcgccagcgagttcgaggcg
ctgcagctcgagtacacctggatcaaggagttcaacccgccgttcaacgtgcagttccgg
gacgacaagtcgtacccgtacctcgcggtgacgctgggggagcgcatcccgcgcgtcatg
gtcacccgcaaccgcaacctcaaggacgcgcgctacttcggcccgtacacgaaggtctgg
gcgatccgcgacacggtcgacctcatgctcaaggccttcccggtgcgcagctgctcggac
ggcgtgtaccgccgcgccgagctcaccggacggccgtgcctgctcggcgacatcggcaag
tgcgcggcgccctgcgtcggccggatcagccccgaggaccaccgggagctcgccgaggac
ttcgtctccttcatggccggcaacgacacgaagtacatccgcgacctcaccgagaagatg
aagcaggcggcgagcaccctcgactacgaggcggccgcgcggcaccgcgacgccatcggc
gcgctcgaggcggcgatgggcaagagcgccgtggtcctgcaggacaacgtggacctcgac
gccttcggcatcgcccaggacgagctcgcggccgcggtgcagcagttcatcgtccgcggc
ggccgcatccgcggtgtgcgctcctgggtggtcgacaaggagctcgacatctcgctcggc
gagctggtcgagacggtgctgcagaacgcctacgagggcgcggacgcgccgccgcgcgag
atcatcgtgcccgagctgccggaggacgccaccgagctggagcagtggctgatggcacgg
cgggtggaggccgacgaggccggacccgtccgccgcggcccgaagtccaccggccgggtc
gagctgcgcgtcgcccagcgcggcgacaaggccgcactcgcccagaccgcggagatgaac
gcgaagaacgcgctcatcctctacaagaccaggcgcagctccgacttcgtcgcgcgctcg
aaggccctgaacgacatccaggacgccctcggcatggccgacgcgccgctccggatggag
tgcttcgacgtctcgcacctcagcggcaccaacatcgtcgcctcgatggtcgtgttcgag
gacggcttgccccgcaaggaccagtaccgccgcttcagcatcccggagtccaccgacgac
accgagtcgatctaccaggtcatctcgcgccgcctggcgtacctgaaggacgacggggcc
ggcgagcaggacgaggcggtggaggcgccggaccccgacgaccagggccgggacggcgac
gaccccgagatcgacgtcgacgccgagatcgcggaggccgcggagcgccgccgccgcaag
ttctcgtacccgccgaacctgctcatcgtcgacggcggccagccgcaggtcgccgccgcg
cagagggcgctggacgagtccggcgtcaccggcatccagctcgcgggcatcgccaagcgc
ctcgaggagctctggctgcccgactccgacttcccggtcatcctgccgcgcaacagcgac
gcgctgttcctggtgcagcgcatccgcgacgaagcgcaccgcttcgcgatcacctaccag
cgggcgcggcgcaagcgggacatctcgagcgtgctcggggagatccccggcctcgggccg
gcgcgcgtgaaggagctgctgaagcacttcggctctgtcgcgcagctgcgccaggcgacg
ccggagcagatcgccgaagtgcgcggggtcgggccggcgatcgcggccgccgtccacgag
cgcctcgccgccggctga
DBGET
integrated database retrieval system