Listeria seeligeri: lse_2389
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Entry
lse_2389 CDS
T01184
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
lsg
Listeria seeligeri
Pathway
lsg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lse_2389 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsg03400
]
lse_2389 (uvrB)
DNA repair and recombination proteins [BR:
lsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lse_2389 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
lse_2389 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
HEM4
UB2H
AAA_7
AAA
AAA_19
DUF5662
AAA_22
AAA_30
DUF87
AAA_25
AAA_5
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CBH28540
LinkDB
All DBs
Position
complement(2460450..2462426)
Genome browser
AA seq
658 aa
AA seq
DB search
MKDKFELVSKYSPQGDQPRAIEQLVSGLRKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATASLFERRDVIIIASVSCIYGLGSPVEYGEMLVSLRVGMEISRDQLLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRVEFFGDEIERIREVDALTGEIIGEREH
VSIFPASHFVTRPDIMKKAIVNIKAELEERLKVLRADNKLLEAQRLEQRTNYDLEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSISETERRRKIQIEYNEKHGITPMTIKKEIRGIIAATS
AADEREAIKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggataaatttgagttagtttctaagtacagtccacaaggagaccaacctagagca
attgaacaattagtatcaggcttaagaaaaggcttgaaacatcaaaccttgcttggggca
accggtacagggaaaacttttaccgtatcaaatgtcattcaagaagtaaataagccgaca
ctagtcatggctcacaataaaacattagcaggacaattatatagtgaattcaaagagttc
tttccaaacaatgcagtagaatattttgtcagttattatgactattaccaaccagaagcg
tatgtaccacaaagcgacacctacattgaaaaagatgccagtattaatgatgaaatcgac
aagcttcgtcactcagctactgcgtcactttttgaacgacgtgatgttattattatcgct
agtgtatcatgcatttatggcttaggttcgccagttgaatacggagaaatgctcgtttcg
ctccgtgttggaatggagattagtcgagaccaacttttacgaaaattagtagatattcaa
tatgatcgtaatgatattgatttccagcgcggtcgttttcgagttcgcggtgatgttgtc
gaaattttcccagcgtcacgggatgaacactgtatgcgcgtggaattttttggtgatgaa
atagaacgtattagagaagtagatgcgctaaccggagaaatcattggtgaacgagaacat
gtttccattttcccggcatctcactttgttacgcgtccagatattatgaaaaaagcgatt
gttaatataaaagcagaactagaagaacgcctgaaagtcctacgagcagacaataagcta
cttgaagctcaacgactcgaacagcgaaccaattatgacttagaaatgatggaagaaatg
ggttactgctctggtattgaaaactattcccgccatttatcattacgtccagctggagtt
acaccatatactttactagattatttcccagatgatttccaaatggtgattgacgagtca
cacgtaacaatgccgcaaatccgaggaatgtttaatggtgaccaagcgagaaagcaaatg
ctagtggatcatggttttagattaccaagtgcgcttgataacagaccacttcgcttagaa
gaatttgaaaaacacattaatcaaatcatgttcatatctgctacaccaggcccatacgag
ctagaaaaaaatccagatgttatcgaacaaattattcgtccgactggattgttagacccg
attgttgaaatccgtccaattcaaggtcaaattgacgatttaatggacgaaattaatgac
agagtagaaaaaaacgagcgagttttaattaccactttaacaaagaaaatgtccgaggat
ttaacgaattacctaaaagaagctggggtaaaagttcaatatctacattcagaagtaaaa
acattagaacgaatcgagattattcgcgacttgcgactaggcgtttacgatgttattgtc
ggaatcaacttgcttcgtgaaggtattgatttaccagaagtatcgctcgtagccattttg
gatgcagataaagaaggcttcctccgttccgaacgttcccttatccaaacaatgggtcgc
gctgcacgtaacgaaaatggtcgagtaatcatgtacgcagacaaaatgacagattcgatg
cgtaattcaattagtgaaacagaacgccgacgtaaaattcaaatcgaatacaacgaaaaa
catggtattacaccaatgaccattaaaaaagaaatccgtggtattattgcagcaacttct
gccgcagatgaaagagaagcaattaaacaacatgacttaagtaaaatgtctaagaaagaa
cgcgatgtcttcattgaaggtatggaacatgaaatgaaagaagcagccaaagcgcttgat
tttgagcgtgctgccgaattgcgtgatgctttactggaaataaaagcggaaggatga
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