KEGG   Legionella sainthelensi: CAB17_19860Help
Entry
CAB17_19860       CDS       T05293                                 

Gene name
ligD
Definition
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
lsh  Legionella sainthelensi
Pathway
lsh03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CAB17_19860 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsh03400]
    CAB17_19860 (ligD)
Enzymes [BR:lsh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CAB17_19860 (ligD)
DNA repair and recombination proteins [BR:lsh03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CAB17_19860 (ligD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme NAAA-beta
Motif
Other DBs
NCBI-ProteinID: AYK03136
LinkDB All DBs
Position
pLA01-117_113k:complement(58487..60997)
Genome map
AA seq 836 aa AA seqDB search
MSLGQYYKKRNFSKTPEPKGKVSKEHSRMFVIQKHAASHLHYDFRIELHGVLKSWAIPKG
PSLDPEVKRLAMQVEDHPIQYGSFEGIIPKGQYGGGTVMLWDKGSWEPLDENPYAAYEKG
HLRFLLHAEKLQGRWDLIRFKDEKHWFLIKHNDEFAKIQDEYDITEALDRSVLSNYNIDE
IATHYDRIWNSSGAQKVKSKRKTRTKKIPKTILTLPEGLIKSEYPDFIPPQLATLVDKPP
VGGQWLHEIKFDGYRILAYKNDSEVLLKSRNNLPWTSEFPSIVEAIGQLPFKQLILDGEI
VILDAKGRSDFQLLQNSLKSKKNASFDYFLFDLVYFEGYDLRKLSLLERKAILKNILEIN
IPLLHYSEHIIKEGKELYQYSCQHSLEGIISKKASATYISKRNKDWLKIKCIKRQEFIIG
GYSSPKGGRSHFGSLFLGVYNKEGTIDFIGNVGTGFTEKSLGEINKLLQENKCSKNPFNT
NPPGYTKAHWLKPTLVCEVEFTEWTKDDHIRHPSFKGLRLDKKATEVLREVEIPLEEVKK
KESTPQKTRSPFVITNPDKVLYPEDHITKKDLLAYYEAISDYILPYISLRPLTLVRCPSH
YNQCFYQRHFNSSTPDTLHPIEDPSDTEHERYIYLNNKEGLLSLIQMGVLEIHPWGSRID
HLDKPDILVIDLDPAPDVPWKKIVSAAKEIREHLTQYQLKSFVKSTGGKGLHVVIPILPE
YDWETIKEFTHVFVQFMEKLKPNDYISNMAKAKRTGKIFVDYLRNQRTATAIGAYSTRAR
HHAPVSAPLAWDELSDKMEDNSYTIKTLPNRLKQLKEDPWKDFWHIKQSLRLDQLE
NT seq 2511 nt NT seq  +upstreamnt  +downstreamnt
atgagccttggtcagtattataaaaaaagaaatttttcaaaaacaccggagcccaaagga
aaagtcagtaaggaacactctcgtatgttcgttattcaaaaacatgcggccagtcatctt
cattacgattttcgcattgaactccatggagtcttaaaaagttgggctatacctaaaggc
ccctctttagaccccgaagtaaagcgtctagcaatgcaggtcgaagaccaccctattcaa
tatggaagctttgaaggaattattccgaaagggcaatatggcgggggtacggtcatgtta
tgggataaagggagttgggagcctttagatgaaaatccctacgccgcttatgaaaaagga
catttacgctttctgcttcatgcagaaaagcttcaaggcagatgggatctaattcgtttt
aaggatgagaaacattggtttttaattaagcataatgacgagtttgcaaaaatccaggat
gaatacgacattaccgaagctctggacagaagtgtcctatctaactacaacatagacgaa
atagccactcattatgaccgaatttggaatagcagtggagcgcaaaaagttaaatcaaaa
agaaaaactagaactaaaaaaataccaaaaacaatccttacgctgcccgaaggtttaatc
aaaagcgaatatcccgatttcatcccaccccagctcgccaccttagtggataagccaccg
gttggagggcaatggcttcatgaaataaaatttgatggctaccgtattttagcttataaa
aatgattccgaagttctgctaaaatcccgcaataatttgccctggacttcagaattcccc
tctattgttgaagccattggtcaattgcctttcaagcaattaattcttgatggtgaaatc
gttattttagatgccaaaggacgttctgattttcaattactgcaaaactctttgaaaagc
aaaaagaatgcttctttcgattattttctttttgatctggtctactttgaaggatatgac
ttaagaaaactctcgttgttagagcgtaaagccattttaaaaaatattctcgaaattaac
atcccattgcttcattacagcgaacacattattaaagaaggtaaagagctttatcaatat
tcttgtcagcattcgttagaaggaatcatttccaagaaagcatcggccacctacatttca
aaacgaaataaagactggttaaaaatcaaatgcatcaaacgccaagaatttattattggc
ggttactcctcccctaaaggaggtcgctctcatttcggctccctattcttaggtgtttat
aacaaagaagggaccattgattttatagggaatgtgggcacagggtttacagaaaaatca
ttaggggaaatcaataaacttcttcaagaaaataaatgctcaaaaaatcctttcaatacc
aaccctcctggttatactaaagcccactggcttaaacctactctagtttgtgaggtagaa
tttacagagtggacaaaagacgatcacattcgccaccccagttttaaaggattgcgttta
gataaaaaagcaaccgaggttctacgtgaagtggaaatacctctagaagaagtcaaaaag
aaagaatccacccctcaaaaaacacgctctccttttgtcattactaatccagataaagta
ctctatccagaagaccacattacgaaaaaagatttactggcttattatgaagctattagt
gattatattttgccttatatctcactaagacctttgactttagttcgttgtccttctcat
tacaatcaatgcttttatcaacgtcattttaattcctcaacacccgataccttgcatccc
atagaggaccccagcgataccgagcatgagcgttatatttaccttaacaacaaggaaggt
ttattgagcttgattcaaatgggtgttttagaaattcatccttggggtagccgtatcgat
cacttagataaacctgatattctggtcattgacttagaccctgcccctgatgtgccgtgg
aaaaaaatagtctctgcggccaaggaaattagagaacatttaactcaataccaattaaaa
tccttcgtcaaaagtaccggaggtaaaggacttcatgtcgtcattcccatacttcctgaa
tacgattgggaaacaattaaagagttcactcacgttttcgtacaatttatggaaaaatta
aaacccaacgattacatcagtaatatggccaaggcgaaaagaactgggaaaatatttgtt
gattatttacgaaatcaaagaactgctacagcaataggcgcttattccactcgcgcaaga
caccatgcaccggtttctgctcctttagcttgggatgagttaagcgacaaaatggaagac
aatagctataccataaaaacccttcctaatcgtcttaaacaattaaaagaagacccatgg
aaggatttttggcatattaaacagtctttgcgcttagaccaattggaataa

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