Ligilactobacillus salivarius UCC118: LSL_0002
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Entry
LSL_0002 CDS
T00337
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta chain
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl03030
DNA replication
lsl03430
Mismatch repair
lsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSL_0002 (dnaN)
03430 Mismatch repair
LSL_0002 (dnaN)
03440 Homologous recombination
LSL_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsl03032
]
LSL_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_0002 (dnaN)
Enzymes [BR:
lsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSL_0002 (dnaN)
DNA replication proteins [BR:
lsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSL_0002 (dnaN)
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSL_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ABD98825
UniProt:
Q1WVP4
LinkDB
All DBs
Position
1532..2671
Genome browser
AA seq
379 aa
AA seq
DB search
MKFSIQRASFIKYLNDVQRAISSKTTIDILTGLKMDLSKDALTLTGSNSDISIETIISIA
DDNAALQIEQEGAVVLPARFFSEIVKKLPEQTMTIEINERFQATITSGSAEFTINGLNAE
EYPHLPEIDSKDQLTVPGDILKQVISQTVIAVSNQESRPILTGIHLVIKNGELLAVATDS
HRLSQRIIKLSGADDAVYDVIIPGKSLSELSKMISDSDENIEIQISENQALFILGNTSFY
TRLLEGKYPDTERLIPKVSEITVDFNAVELLQSIERASLLSHEGRNNVVKLAINPSAQSV
ILSGNTPEVGNVEEELHFKNLEGSELEISFNPDYMKDALRSFGQSEITIAFTQPLRPFTI
VPTEDKDNFVQLITPVRTF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcaattcaacgagcatcatttatcaaatatttaaacgatgtccaacgagca
atatcatccaaaacgacaattgatattttgacaggattaaaaatggatttgtcaaaggat
gcattaactttaactggtagcaattcagatatatccattgaaacaatcatttcaattgca
gatgataatgctgcattacaaattgaacaagaaggtgcagttgttttacctgctcgtttc
tttagtgaaattgtaaagaaattaccagaacaaacaatgacaattgaaattaacgaaaga
tttcaagcaacaattacttctggatcagcagaatttacaattaatgggttaaatgctgaa
gaataccctcatcttccagaaattgattcaaaagatcaattaactgttcccggcgatata
ctaaaacaagttattagtcaaacagttattgctgtttctaatcaagaaagtcgccctatt
ttaactggtattcatttggtaataaagaatggagaattgcttgcagtagcaactgactct
catcgtttaagtcaacgtatcatcaaattgtcaggtgctgacgatgcagtttatgatgtt
attattccaggaaaatctttaagtgaattatctaaaatgatttctgatagtgacgaaaac
attgaaattcagatctcagaaaatcaagcattattcattctaggcaatacttctttctac
actcgtttactagaaggaaaatatcctgatactgaaagattaattccaaaagtttcagaa
attacagttgattttaatgcagtagaattacttcaatcaattgaacgtgcttctcttcta
tctcatgaaggtcgcaataatgtagttaaattagcaattaatccaagtgcacaaagtgtt
attctttcaggtaatactcctgaagtcggaaatgttgaagaagaactacatttcaaaaat
ttagaaggttcagagttagaaatttcatttaatccagattatatgaaagacgccctacgt
tcatttggtcaatcagaaattacaattgcgtttacacaaccattacgtccattcacgatt
gtaccaacagaagataaagataattttgtccagttgattacacctgtgagaacattctaa
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