Ligilactobacillus salivarius UCC118: LSL_0625
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Entry
LSL_0625 CDS
T00337
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsl03019
]
LSL_0625 (rnc)
03009 Ribosome biogenesis [BR:
lsl03009
]
LSL_0625 (rnc)
03036 Chromosome and associated proteins [BR:
lsl03036
]
LSL_0625 (rnc)
Enzymes [BR:
lsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LSL_0625 (rnc)
Messenger RNA biogenesis [BR:
lsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LSL_0625 (rnc)
Ribosome biogenesis [BR:
lsl03009
]
Eukaryotic type
90S particles
RNase
LSL_0625 (rnc)
Prokaryotic type
rRNA processing factors
LSL_0625 (rnc)
Chromosome and associated proteins [BR:
lsl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LSL_0625 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Dicer_dimer
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
ABD99435
UniProt:
Q1WUA0
LinkDB
All DBs
Position
668797..669495
Genome browser
AA seq
232 aa
AA seq
DB search
MIEGLQEMLKRDFNITFKDVDLLDAAFTHASYVNETPERKKKLKYYERIEFLGDAVMQLC
VSEYIYEHYPEMPEGKMSRLRAAMVRADSFSKFAIECHFNEYIRLGKGEEKGNARQRPSL
LCDIFESFIGALYLDQGKDEVVRFISKVIFPKLELGWFDHMMDNKTELQEVLQQNGECKI
KYNEVNVTGPDNERVYTMNVVVNNEVMGEGTGRTKKAAEQMAAYQALKKLRK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaggattacaagaaatgttaaaaagagattttaacatcacttttaaagatgta
gacttattggatgcggcatttactcatgcatcgtatgtaaatgaaactccagaaagaaag
aaaaagttaaaatattatgaaagaatagaatttttgggtgatgctgtaatgcagttatgc
gtgtccgaatatatttatgaacattatccagaaatgcctgaaggaaaaatgtcaagacta
agggcggctatggtaagagctgatagttttagtaaatttgctattgaatgccatttcaat
gagtatattagattaggtaaaggtgaagaaaaaggaaatgctcgtcagcgtccaagtttg
ttatgtgatatttttgaatcatttataggtgccttatatttagatcaaggaaaagatgaa
gttgtaagatttatttctaaggttatttttccaaaattagaattgggttggtttgatcat
atgatggataataagactgaattacaggaagtcttgcaacaaaacggagaatgtaaaatt
aaatataatgaagttaatgttacaggtccggataatgaacgtgtctatacaatgaatgta
gttgttaataatgaagtcatgggcgaaggtactggacgtactaaaaaggctgctgaacag
atggcagcatatcaagctttaaagaaactcagaaagtag
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