Ligilactobacillus salivarius UCC118: LSL_0728
Help
Entry
LSL_0728 CDS
T00337
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LSL_0728 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_0728 (recD)
Enzymes [BR:
lsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LSL_0728 (recD)
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LSL_0728 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD_C
UvrD-helicase
HHH_5
TsaE
T2SSE
HTH_IclR
AAA_29
JHBP
nSTAND3
ATP-grasp_2
DEAD
AAA_16
SLFN-g3_helicase
AAA_28
AAA_22
AAA
IMS_HHH
Ribosomal_S13
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABD99538
UniProt:
Q1WTZ7
LinkDB
All DBs
Position
774802..777276
Genome browser
AA seq
824 aa
AA seq
DB search
MSEELDLFAQEDNGKYLIGTVNGVYFEASDSFYKVLQVLIKETNFDWDDQRITVTGSFAN
IQTDSLYRFEGNVVEHQRYGKQFQAESYQLELPSTKDGVIAYLSSDEFVGIGKKTAEKIV
KKLGVDAIDVLNNDMDKLEELGLSEKQKDSIKKVLKENYGIDKIIIELNSLGFTSTMAGR
IYNNYTNSTLEIIHEDPYRLSVDIDGISFTKADQIAQQFGFASDSPGRIRGAIFQSLYDL
TYATGNTYVELNPLVTETLKLLESNRNEAIDPQLVADQLIKLTEEDKIKSDDNKVYSRTF
FNAEWNIAENLYRLLKSGNSDLPNNDALLDKLLIKAEDQLGIDYDSEQKRAIKDAIKSPV
FLLTGGPGTGKTTIINGIVAVYALLNDIDLDIGKYDKDNPFPILLAAPTGRAAKRMAEST
GLPASTIHRMLGINAHDDKLPEDIQELEGALLIVDETSMVDTLIMDLLLNSIPSHMQVIF
VGDRNQLPSVQPGQVFSDLLVSDALPKKELTKIYRQGEGSSIINLAHSIKNGELPADFTK
AQSDRAFIPCEAGQLTSAVEQVVKAALNKGNSKDDIQVLAPMYRGNVGINRLNTILQELL
NPANPRQKEVIFNEQVFRIGDRVLHLVNDPENNVFNGDIGKIVGINIPKTKKDKKGEQII
ADFDGNEVTFDKKDWINLTLAYCMSIHKSQGSEFPIVVLAMLPQYQRMFARNLLYTGITR
AKQKLVLLGNVSSFRQSAEIISLNRKTGLLKRIRMEFGVEGKPVEKTDNEEVAVNNNKEQ
DSIVEEQDEPFIYNDGILTMDIIVNNKVDAMIGMNDITPYDFMR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggaattagatctttttgcccaagaagataatggtaagtatcttataggaaca
gtaaatggtgtctattttgaggcttccgatagtttttataaagttctacaagtcttgatt
aaggaaactaatttcgactgggatgatcagagaataactgtgacgggaagctttgctaat
atccagacagattctttatatcgatttgagggaaatgttgtagaacatcaacgttatggg
aaacagttccaagctgaaagttatcaactagaattaccttctacaaaagatggtgtaatt
gcatatctttcgagtgatgaatttgttggtataggtaagaagacagctgaaaaaatagta
aaaaaattaggtgtagatgctattgacgttttaaacaatgatatggataaattggaagaa
cttggattatctgaaaagcaaaaggacagtataaaaaaagttttaaaggaaaattatgga
attgataaaatcataattgaacttaatagtttaggttttactagtacaatggctggaagg
atctataataactatacaaacagtaccttagaaataatccatgaagatccatataggtta
tccgtagatattgatggaattagctttactaaagcagatcaaatagcacaacaatttggc
tttgctagtgattcccctggtagaattcgaggagctatttttcaatcattatatgatttg
acttatgctacaggaaatacttatgttgagttaaaccccttagtaactgaaacattaaag
cttcttgaaagtaatcgcaatgaagcaattgacccacaattagttgcagatcagttaatt
aagcttactgaagaagataaaattaagtctgatgataataaagtgtacagtagaaccttt
ttcaatgctgagtggaatatagcagagaatttatatcgactattgaaatcgggcaacagt
gatttgccaaataatgatgcgttattagataaactcttaataaaggctgaggatcaattg
ggaatagattatgatagtgaacaaaaaagggcgataaaagatgcaattaaatcgccagtt
tttctgttaacaggtggtccaggtactggtaagacaacaattattaatgggattgttgca
gtatatgccttattaaacgacatagatttagatattggtaagtatgataaagataatcca
tttccaatattgttagctgcaccaacaggacgagctgctaaaagaatggcagaatcgacg
ggattaccagcttctacaattcatagaatgttaggaataaatgcacacgatgataaatta
cctgaagatattcaagaacttgaaggtgcattgttaattgtcgatgaaacatctatggta
gatacacttatcatggatttattgttaaatagtattcctagtcatatgcaagttattttt
gtgggagatagaaatcagcttccatcggtacaaccagggcaagtattttctgatttatta
gttagtgatgccttacctaaaaaagaattaacgaaaatctatagacaaggtgaaggttcc
tcaataattaatttggcacattcaataaagaatggagagctaccagcagactttactaag
gcacaatctgacagagcatttattccatgtgaagctgggcaattaacttctgctgttgag
caagtggtaaaagctgctttgaataagggaaatagtaaagatgatattcaagtattagct
ccaatgtatcgtggtaatgtaggaattaataggttaaatactattttacaagaattattg
aatccagctaaccctcgacaaaaagaagttatttttaatgagcaagtatttagaattgga
gatagagttcttcatttagtgaatgatcctgaaaacaacgtcttcaatggtgatattgga
aagattgtgggaataaatatacctaaaactaaaaaagataaaaagggtgaacagataata
gcagatttcgatggaaatgaggtaacttttgataaaaaggattggattaatttgacgttg
gcttattgtatgtccatccataaatctcaaggtagtgagtttccaattgtagtgttggca
atgttaccacaatatcaaagaatgtttgctagaaacttgttatatacaggaataactaga
gctaagcaaaaattagttcttttagggaatgtttcttcatttagacaaagtgcagagatt
atctctctcaatagaaagactggattattgaaacgtataagaatggaattcggagtagaa
ggaaaaccagtagaaaaaactgataatgaagaagttgctgtgaataataacaaagaacaa
gattccattgttgaagaacaggatgaaccgttcatttataatgatggtatattgaccatg
gatattattgttaataacaaagttgatgcaatgataggtatgaatgatataacaccttat
gattttatgagataa
DBGET
integrated database retrieval system
