Candidatus Liberibacter solanacearum: CKC_03010
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Entry
CKC_03010 CDS
T01373
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lso
Candidatus Liberibacter solanacearum
Pathway
lso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CKC_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lso03021
]
CKC_03010
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_03010
Enzymes [BR:
lso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CKC_03010
Transcription machinery [BR:
lso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CKC_03010
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CKC_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ADR52351
UniProt:
E4UDB1
LinkDB
All DBs
Position
644039..644419
Genome browser
AA seq
126 aa
AA seq
DB search
MRITVEDCIDKVENRFELVLLASYRARHISQGSPPTVEVGNDKNTVISLREIASGALSPD
DLEEDFIHSLQRHVEVDEPDTPVEDSDLNRDFPWNKPESLSFRQMSEGDLLEGIDNIVVP
DKRDDT
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
gtgaggattactgtagaagattgtattgataaagtggagaatagattcgagcttgttctt
ctggcgagctatcgtgcaaggcatatatctcagggatctcctccaacagttgaagttggt
aatgataagaatacggtcatttctttgcgagagattgcaagtggtgccttgtctccagat
gatcttgaagaagactttattcattctcttcagaggcatgttgaggttgatgagcctgac
actcctgttgaggattctgatctcaatcgtgatttcccatggaataagcccgagtctttg
tcttttagacaaatgtcagaaggggatcttttggaaggaattgataatattgttgttcca
gacaaaagggatgatacctga
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