Lysobacter soli: GOY17_11115
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Entry
GOY17_11115 CDS
T06337
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lsol
Lysobacter soli
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsol03016
]
GOY17_11115 (thpR)
Enzymes [BR:
lsol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GOY17_11115 (thpR)
Transfer RNA biogenesis [BR:
lsol03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GOY17_11115 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
QGW65414
UniProt:
A0A6I6GGE9
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All DBs
Position
complement(2457977..2458552)
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AA seq
191 aa
AA seq
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MAQLGLGFDDAPTGEPHRLFFALWPDDALRPRIAAAAASVISEHAPGGRPLKPDRYHVTL
QFLGDFRPLPTSLVEDAKAAAAAVRSPAFELSLDEVGSFRGANVWWLGSHHAPDGLRALF
DGLGRSLAQHRVPVKSSASFVPHLTVQRDVRRFIAPTPVPPLPWPVREFVLIDSQPGRGT
PYEVIGRWPLG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgggactgggattcgacgatgcaccgacaggcgagccgcaccgcctgttc
ttcgcgctatggcccgacgacgcgctgcgtccgcgcatcgccgcggccgcggcgtccgtc
atatcggaacatgcgccgggcgggcgtccgctgaaacccgaccgctaccacgtgacgctg
cagttcctcggcgatttccgcccgctgccgacatcgttggttgaagacgcgaaagccgcg
gccgccgccgtgcgttcgccggcgttcgagctgtcgctcgatgaagtcggcagcttccgc
ggcgcgaacgtctggtggctcggttcgcaccatgcgcccgatgggctgcgcgcgctgttc
gatgggctcggtcggtcgctggcacagcatcgcgtcccggtgaaatcgtccgcgagcttc
gtgccgcacctcaccgtgcaacgcgacgtgcgacgcttcatcgcgcccacgccggtgccg
ccgctgccctggcccgtgcgcgagttcgtgctgatcgacagccagcccggacgcggcacg
ccgtacgaggtgatcgggcgatggccgctgggctga
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