Lysobacter soli: GOY17_18590
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Entry
GOY17_18590 CDS
T06337
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
lsol
Lysobacter soli
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GOY17_18590 (hrpB)
Enzymes [BR:
lsol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GOY17_18590 (hrpB)
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
Flavi_DEAD
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
QGW66721
UniProt:
A0A6I6GPD9
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Position
complement(4091241..4093739)
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AA seq
832 aa
AA seq
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MTRIDFPIDPLLPQIRASLADHPRLVLEAPPGAGKTTQVPPALLDAPWLAGRKIVMLEPR
RVAARAAAHFMARQRGEDVGGTVGYRIRFENRVSAQTRIEVVTEGILTRMLQDDPMLESV
GALLFDEFHERHLSADLGLALALDVQAGLREDLRIVVMSATLDGERLAAFLDAPRLSSAG
RSYPVSISHFAARRDESAEHHTRRAVEHALAQHPGDVLVFLPGQREIARVDSLLASMADA
DVLTLHGELPVEAQTRVLQPDPEGRRRLVLATNVAESSVTLPGVRVVIDSGLAREPRYDP
NSGFARLDVVNIAQASADQRAGRAGRVAEGWAYRLWPESQRLEPQRRPELAQVELAGLAL
ELAAWGDADLRFVDAPPPGALAAARELLHRLGALDGGSITPLGRRMLALGTHPRLAAMLL
APKDAREQALACDLAALIEARDPLRSRSDSVAERWQALAAFRAGRVAPDASRSSLAALDQ
AAKQWRRRLRLDAAPPPDAPSHQLGDVLLHAFPDRIARQHPSDPYRYQLANGRSVKLFDD
STLYGEPWIVVSELRDEARDARVLRAAPLDEARLREDFPQRFVTEDRVVWDTNTRGIAAV
RETRFDRIVIESKPLAKPDPARYADALVDAVRQLGLRALPWTPSQRQWRDRVRCLHAWMP
ELDGLPDLSDAALLDSLDEWLKPALTGKTRLDALDEQAFGDALKSTTPWALRQKIDALAP
TRIVVPSGMERGIEYAFDDEADAPIAPVLAVKLQELFGLADTPRIADGRVPLTLHLLSPG
GKPLQITQDLKGFWDRTYPEVKKEMKGRYPKHPWPDDPWSATATHRAKPRVR
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcatcgacttccccatcgaccccctgctgccgcagatccgcgccagcctggcc
gaccatccccgcctcgtgctcgaagcgccgcccggcgccggcaagaccacgcaggtgccg
ccggcgctgctcgatgcgccgtggctcgcgggccgcaagatcgtgatgctcgaaccgcgt
cgcgtggccgcgcgcgcggcggcgcacttcatggcgcgccagcgcggcgaggacgtcggc
ggcacggtgggttatcgcatccgtttcgagaaccgcgtgtccgcgcagacgcgcatcgag
gtcgtcaccgaaggcatcctcacgcgcatgctgcaggacgacccgatgctcgaaagcgtc
ggcgcgctgctgttcgacgagttccacgagcgccatctgtcggccgacctcggcctcgcg
ctcgcgctcgacgtgcaggccggcctgcgcgaggacctgcgcatcgtcgtcatgtcggcg
acgctcgatggcgaacggctggcggcgttcctcgatgcgccgcggctgagcagcgccggc
cgcagttatccggtttcgatttcccacttcgccgcgcgtcgcgacgaatcagctgaacat
cacacgcgccgcgccgtcgaacatgccctggcgcagcatcccggcgacgtgctcgtcttc
ctgccggggcagcgcgaaatcgcgcgcgtcgattcgctgctcgcttctatggccgacgcg
gacgttctcacattgcacggcgagctccccgtcgaggcgcagacgcgcgtgctgcagccc
gatcccgagggccggcgccgcttggtgctcgccaccaacgtcgccgaatccagcgtgacg
ctgcccggcgtgcgcgtggtgatcgactcggggctcgcgcgcgaaccgcgctacgacccc
aacagcggtttcgcgcggctggatgtggtgaacatcgcgcaggcgtccgccgaccagcgc
gcgggccgcgccgggcgcgtggccgagggttgggcgtatcggctgtggcccgagtcgcag
cggcttgaaccgcagcgtcggcccgagctggcgcaagtcgagctggccggcctcgcgctc
gaactcgccgcgtggggcgatgccgacctgcgcttcgtcgatgcaccgccgcccggtgcg
ctcgcggcggcgcgtgaactgctgcaccggctcggcgcgctcgacggcggttcgatcacg
ccgctgggccggcgcatgctcgcgctgggcacgcacccccgactggcggcgatgctgctc
gcgccgaaggatgcgcgggaacaggcgctcgcctgcgaccttgccgcgctgatcgaagcg
cgcgatccgctgcgctcgcgcagcgattcggtcgccgaacgctggcaggcgctcgccgct
ttccgtgcgggccgcgtcgcgcccgatgcatcgcgttcctcgctcgccgcgctcgaccag
gcggcgaaacaatggcgccgtcgcctgcgcctcgatgccgcgccgccgccggatgcgcca
tcgcatcagctcggcgacgtgctgctgcacgccttccctgaccgcatcgcgcgccagcat
ccgtccgatccgtatcgctaccagctcgccaacgggcgcagcgtgaagctgttcgacgac
tccacgctgtacggcgagccctggatcgtggtgagcgaactgcgcgacgaggcccgcgac
gcgcgcgtgctgcgtgccgcgccgctggacgaggcgcgcctgcgcgaggacttcccgcaa
cgcttcgtcaccgaggaccgcgtggtgtgggacacgaacacgcgcggcatcgcggccgtg
cgcgaaacgcgcttcgaccgcatcgtcatcgaaagcaaaccgctcgcgaaacccgatccc
gcccgctacgccgacgcgctggtcgacgccgtgcgccaactcggcttgcgcgcgttgccg
tggacgccctcgcagcgccagtggcgcgatcgcgtgcgctgcctgcacgcatggatgccg
gagctggacggactgcccgatctctccgacgccgcactgctggactcgctggacgagtgg
ctcaaacccgcgctcacgggcaagacgcggctggacgcgctcgacgagcaggccttcggc
gacgcgctcaagtccaccacgccgtgggcgctgcggcagaagatcgatgcgctcgcgccg
acgcggatcgtcgtgccctccggcatggagcgcggaatcgagtacgcgttcgacgacgag
gccgatgcgccgatcgcgcccgtgttggcggtgaaactgcaggaactgttcgggctggcc
gacacgccgcgcatcgccgacggccgcgtgccgctcacgctgcacctgctctcgcccggc
gggaagccgctgcagatcacgcaggacctgaagggcttctgggatcgcacgtatccggaa
gtgaagaaggaaatgaaaggccgctaccccaagcatccgtggccggacgatccgtggagc
gcgacggcgacgcaccgggcgaagcctcgcgtcaggtga
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