Lonchura striata domestica (Bengalese finch): 110468810
Help
Entry
110468810 CDS
T05897
Symbol
ATXN1L
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110468810 (ATXN1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
110468810
NCBI-ProteinID:
XP_021382646
LinkDB
All DBs
Position
11:177801..181105
Genome browser
AA seq
688 aa
AA seq
DB search
MRAGQERSQECLPPKKRELAAANTGTEAGRAGGAQGSGSGPEWARTARPAPATPRYGPGE
APEAAAGLTVDQYGMLYKVAAPPATFSPTGLHPVVNVSPLPPAFSVTSPIIQHPAVPFPS
IHYAQIPSASLQLIGSPYTVPYAVPPAFMPSPLLSPSTNLSAPHVPHFVPYASLFTEEAA
PSSQTTSPTHSFNKSTSAASPGQMQHHTASQPVDMPPGRIPVYYQMSRLPPGYSAYEAPV
AGGNPDSPQQDSQLSSEVAAANGGQRPLEQSVARRPNEAVDSASSAAEDCLPPGAAAGSM
GDGQFLPGHQMLGREISVPTHRSTPDADLEVQRVVGVLASQDYHVLAAQRKDDPSPLNLC
HNTTDGQGDMLRNTTDRAAAGNSQSQSPCGMSPEETARQRQLAKGMVIANGKPVLVPVGS
EPVRSSTSEVLLRESPDAQARGYVLEKELAQLQPPSSSQLPSHFMKGAIIQLATGELKRV
EDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVTLHFVVGEQQSKVSIDVPPEHPF
FVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSMNGNSPSQANSPLMDQLVSAR
ERLERTAQGPREPCDRAGERKSHTDRTSTAQSSHAESSQSEAGNLYSLAPGFQRYSVQAE
EPRPSLLRPSFIPQEVKLSIEGRSNAGK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgggccaggagcgcagccaggagtgtctcccgcccaagaagcgagaacttgcc
gccgccaacactggcaccgaggcgggacgggccgggggagcccagggctcgggctcgggc
cccgagtgggctcgcacggctcgcccggctcccgccacaccgcgctacggtcccggcgag
gcccccgaggcagcagcggggctgacggtggaccaatacgggatgctctacaaagtggca
gcaccgcctgccaccttctcccccacgggcctgcaccccgtggtgaacgtgagccccctg
cccccagccttcagcgtgacctcgcccatcatccagcacccggcggtgcccttcccctcc
atccactatgcacagatcccttcggcttccctgcagctcattggttccccctacacagtg
ccctatgccgtccctcctgccttcatgcctagtcctctcctgtctccttccacaaacctc
agtgccccccatgtcccccactttgttccatatgcctccctgttcacagaagaagctgct
ccttcctcccagactacctctcctacccacagcttcaacaaatccacctctgcagcctct
cctgggcagatgcagcaccacactgcgtcccaaccagtggacatgccaccggggaggatt
cctgtttattatcagatgtcccgcctcccaccaggctattcagcctatgaggcacctgta
gcaggtgggaacccagactctcctcagcaagacagtcagctgagctcagaggtggctgcg
gccaatggtgggcagaggcccctggagcaaagtgtggccaggaggcccaacgaggctgtg
gactctgccagcagtgcagctgaggactgtctgcccccaggggctgcagcaggatctatg
ggtgatggacagttccttccaggtcaccagatgctgggaagagagatctctgtgcctact
cacaggagcaccccagacgctgatctggaggttcagagagtggtgggggtgttggcatct
caggattatcatgttctggcagcccagaggaaagatgacccaagccctttaaatctttgc
cataataccactgatgggcagggagacatgctgaggaacaccacagatagggctgcagct
gggaacagccagtcccagagcccatgtggaatgtcccccgaagagactgctagacagaga
cagttagccaaaggaatggtgatagccaatggcaagccagtacttgttcccgttggatct
gagcccgtcaggtcttccacttcagaagtcctgctgagggaaagcccagatgcacaggct
cgaggatatgtgcttgaaaaggagctggcccagttgcagccacccagttcctcacaactg
ccctctcacttcatgaaaggagccatcatccagctggcgacgggagagctgaagcgggtg
gaggacctgcagactcaagactttgttcgcagtgcggaggtgagtggaggcctgaagatc
gactccagcactgtggtggatattcaggaaagccagtggcctgggcttgtcacactgcat
tttgtggttggggagcaacaaagtaaagtgagcattgatgtgcccccggagcatcccttc
tttgtgtatggccagggctggtcctcctgcagccccgggaggactgctcagctctttgct
ttaccctgtcacaggctgcaagtgggggatgtatgcatatcaatcagtttacagagcatg
aatggcaactctccttctcaggccaactcccctctcatggatcagctggtatctgctagg
gagagattggaacgaacagcccaggggcccagagagccatgtgacagagctggtgaaagg
aagagccacacagatagaaccagcacggctcagagctcccatgcagaatcttctcagtct
gaggctggcaatctgtacagtttggccccaggcttccaaagatacagcgtgcaggcagag
gagcctcggccctctctgctccgtccctctttcattccccaggaggtcaagctgtctatt
gaagggcgttcgaatgcagggaaatga
DBGET
integrated database retrieval system
