Lonchura striata domestica (Bengalese finch): 110470054
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Entry
110470054 CDS
T05897
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110470054
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110470054
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
110470054
Peptidases and inhibitors [BR:
lsr01002
]
Metallo peptidases
Family M10
110470054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
Reprolysin_5
PG_binding_1
Reprolysin_3
Reprolysin_4
Peptidase_M54
Peptidase_M66
DUF4953
Metallopep
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
110470054
NCBI-ProteinID:
XP_021385079
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Position
1:75385566..75390987
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AA seq
400 aa
AA seq
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MQLFFGLEVTGKPDLDTLEVMKKPRCGVPDVEQYAFTPGNPKWKRNNLTYRILNYTPKMR
RADVDEAVRRALNVWSNVTPLTFQKVEGEIADIMISFAYRDHRDNSPFDGPNGQLAHAFQ
PGEGLGGDVHMDEEEAWTKDGRGYNLFIVLAHELGHSLGLSHSNDPGALMYPTYSYTDPS
EFRLPQDDIDGIQAIYGRANAAVQPTGPITPEACDPNLTFDSITTLRGEIFFFKGRYMLR
KHPERTETELNFISLFWPRLPSGIQAAYENVETDEITIFKEDKYWVIRGYDVLPGYPKPI
YRFGFPKTVKRVNAAYNDEATGKTYFFVADRYWRYDENKKSMDHGYPRKIVSDFGNIGRV
DAAFQKDGYVYFFHGTTQFQFDPRAKRIVRQMKSTSWFNC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgttcttcggactagaagtgactggaaaacctgatcttgacacattggaggtg
atgaaaaaacccagatgtggtgtacctgatgtggagcaatatgcattcacaccagggaat
cccaaatggaaaagaaataatctgacatacaggattttgaattacaccccaaagatgaga
cgagctgatgtagatgaagcagtcagaagagctctcaatgtctggagcaacgtgacacca
ttgacattccaaaaggttgagggcgaaatagcagatataatgatctcttttgcatataga
gaccaccgtgacaattctccttttgatggtcccaatggacagctggctcatgcattccag
cctggtgaaggtcttggtggagatgtgcatatggatgaggaggaagcttggacaaaagat
ggaagaggctacaatttgttcattgttcttgcccatgagctcggccattcgctgggtctg
tctcattcaaatgatcctggagcactgatgtatccaacttactcctacaccgaccccagt
gaattccgtcttcctcaggatgacattgatggaattcaggccatctatggacgggctaat
gctgctgtgcagccaacaggacccataactccagaagcttgtgacccaaatctgacattt
gattctattactaccctacgtggagaaatattcttcttcaagggcagatacatgctgcgc
aaacatcctgaaaggacagagacagagctcaattttatctcactgttctggccaaggtta
ccatcaggaattcaagctgcttatgaaaatgttgagactgatgaaattacaatttttaaa
gaggataaatattgggtcatcaggggatatgatgttctacctggctatcccaaaccaatc
tatcgctttgggttcccaaagactgttaaaagagttaatgcagcttacaatgatgaagcc
acagggaaaacatacttctttgtagctgacagatactggagatatgatgaaaacaaaaaa
tccatggatcatggttatcccaggaaaatagtctctgactttggaaacattggcagggtt
gatgctgctttccagaaagatggctatgtgtacttcttccatggaacaacccagttccag
tttgatcctcgtgccaaacggattgttcgacaaatgaagagcaccagctggtttaattgt
taa
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