Lonchura striata domestica (Bengalese finch): 110470659
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Entry
110470659 CDS
T05897
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X2
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110470659 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsr01007
]
110470659 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110470659 (IARS1)
Enzymes [BR:
lsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
110470659 (IARS1)
Amino acid related enzymes [BR:
lsr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110470659 (IARS1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110470659 (IARS1)
Prokaryotic type
Other AARSs
110470659 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
110470659
NCBI-ProteinID:
XP_021386152
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All DBs
Position
12:complement(3307606..3401016)
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AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPNEEEKILTLWKNLNCFKECLKQSKNKPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAAYNKEC
RGIVMRYAKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVTVSFPLEEDPSVALVAWTTTPWTLPSNLALCVNP
ELQYVKLRDKATGKIYILMESRLVALYKSDSEYQILDRFPGIVLKGKKYKPLFEYFIQCK
EKGAFTVVVDGYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTA
EVADFAGQYVKDADKHIIRWLKEKGRLIHSTTFQHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDLEEVVC
VGSVAELEELSGVKVTDLHRENIDQLSVPSRRGKGALRRVPEVFDCWFESGSMPYAQVHY
PFQNRRELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMHIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDVLTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPAALENIRSLEKYVLEELNVRALTLSADKGRFGVRLRAEPEHT
VLGRRLKGAFKPVMAAIKELSSEQLERFQETGSIFVEGHELHGEDLRLMYQMTEGSAQFE
AHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRALPEGEYL
DTVIQQHAEFIFATIKADLKPYPVPTSKEVLIQETTQLKGSELEITLVRGGVCHSVGPAC
AYVNLKVCVNGTEQDGVLLLENPKGDNTLNFTGLVDAVSCIFGLKNSKLTVFNGNTELIN
QTDLLGLSGKTLHVTAGSAPALPSSPSALLCQYINLQLINAKPQECQKGTVGTLLMENPV
GQNGLTYKGLLHETAKVFGLRSRRLKLFLDEALTHEITKDISMKNLNMKTLYVHVIPTTA
EC
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacataaattttccaaatgaggaagagaagatattgacg
ctctggaaaaatcttaattgtttcaaggaatgcctgaagcaatcaaagaacaaacctagg
tttaacttctacgacggccccccgtttgccacggggctcccccactatggccacattctt
gcaggaaccattaaagacattgtgaccagatttgctcatcagagtggttttcatgttgac
agaaggtttggctgggattgccacggcttacctgtggaatatgagattgacaagacttta
ggcattaaaggaccagaggatgtggcaaagatggggattgcagcttacaacaaagagtgc
agagggattgtgatgagatacgccaaggagtgggagttcagtgttaccagattaggacgc
tggattgactttgaaaatgactataaaactctttaccccgagttcatggagtctgtgtgg
tgggttttcaagcagctctatgacaaaggcctggtgtatagaggggttaaggtcatgcct
ttttcaactgcatgcaacactcccctgtccaactttgagtcccatcagaactacaaggat
gttcaggatccttcagtgaccgtgagcttcccactggaagaagatccaagtgttgctctt
gttgcctggaccacgactccctggaccttgcccagcaatctggccctttgtgttaaccca
gaactgcaatatgtaaaactgagagataaagccacagggaagatttacattttgatggag
tccaggctggtggcactgtacaaatctgacagtgaatatcagatacttgacaggtttcct
ggtattgttcttaaaggcaagaaatacaaaccactctttgaatattttattcagtgcaaa
gaaaaaggtgcctttactgtggtagtggatggttatgtgaaggaggaggaaggcacagga
gttgtccatcaggctccctattttggtgctgatgattacagagtctgcatggattttaat
atcattcagaaggactctgtccctgtgtgtcctgttgatgcatcaggctgcttcacagca
gaagtggctgactttgctgggcagtatgtgaaggatgcagataagcacatcatcagatgg
ctgaaggagaagggccggctgatccacagcaccaccttccagcacagctaccccttctgc
tggaggtcagatactccactgatctacaaagctgtgcccagctggtttgtcagagtggag
cacatggtggagaagctgctggagaataatgcccagtgctactgggttccagattttgtg
cgggagaagcgctttgggaactggctgaaggacgctcgggactgggccatctctcggaac
cgctactggggcacccccatccctctgtgggtcagcgaggatttggaggaggtggtttgt
gttggttcagtggcagaattggaggagctgtctggagtgaaagtgacggatctgcatcga
gaaaacatcgaccagctgagcgtcccgtcgcgccgcgggaagggcgcgctgcgccgcgtg
cccgaggtgttcgactgctggttcgagagcggcagcatgccctacgcccaggtgcactac
cccttccagaacaggcgggagctcgaggacgccttccccgccgacttcatcgccgagggc
atcgaccagacgcgaggatggttctacactttgctggtgttgtccactgctctttttggg
aagcctcctttcaagaatgtcattgtgaatggccttgtccttgccagtgatggccaaaaa
atgagcaaaaggaagaagaattaccccgatccgatgcacattgtgaacagttacggagct
gatgcactcaggttgtacctgatcaattctcccgtggtaagggcagaaaacctgaggttt
aaggaggagggggtgagggatatcctgaaggatgtgttcctgccctggtacaatgcctat
cgcttcctggtgcagaacgttcagatcctgcagcacaaggatgagggaagagaattcctt
tacaatgagaacacagttaaggaaagcaataacatcatggataaatggattctttctttc
acccagtctctcatccagttcttcaaagctgaaatggcagcttacaggctgtacacggtg
gtgccccggctggtgaagtttgtggatgttctgaccaactggtacgtcagaatgaaccgc
aggaggctcaagggcgagaatgggactgaggactgcattatggccttggaaactttgttt
agtgtcttgttctccatgtgcagactcatggcaccatatactccatttatcactgagctg
atgtaccagaatctgaaaacactcattgatccagcctcggtccaggagaagaacactgag
agcattcactacctcatgctcccccaagtcagggaggatctcatcgacaaaaaaattgaa
agtgccgtttcttgtttgcagtctgtgattgagctgggacgagtgatcagagacagaaaa
accatcccagtcaagtatcctttgaaagaagtagtagttatccaccaggatccagcggct
ctggaaaacatcaggtctttagagaagtatgtacttgaggagctgaacgtgcgggcgctg
acgctgtctgcggacaagggccggttcggcgtgcggctgcgggccgagcccgagcacacc
gtgctgggccgccgcctcaagggcgccttcaagcccgtcatggctgccatcaaggagctc
agcagcgagcagctggagaggttccaggagacaggcagcatttttgtggaaggacacgaa
ctccatggggaagatctccgtctcatgtatcagatgacagaggggtctgcccagttcgag
gcacactccgatgctcaggttttggtgttgctggatgtgacaccagaccaatccatggtg
gatgaaggagttgcccgggaagtgatcaatcgcatccagaagcttcgcaagaagaggaac
ctggtccccacagatgagatcacagtgtactacagggccctgccagagggggaatacctg
gacactgtcatccagcaacatgctgagttcatttttgccacaattaaggcagacctgaag
ccttacccggtgcctacctcaaaggaagttctcatccaggaaacaacccaactgaaggga
tcagagctggagatcacactggtcagagggggggtgtgccattctgttggcccagcctgt
gcctatgtgaacctcaaagtttgtgtcaatgggacagagcaagatggtgtgttgctgctg
gaaaatccaaaaggagataataccttgaacttcactggacttgtagatgctgtctcctgc
atttttggtcttaaaaattccaaactgacagtttttaatggaaacacagagctgatcaac
cagacggacctgctgggcctcagtgggaagactctgcacgtgacagcagggtcagcccct
gccctgcccagctcccccagtgccctgctctgccagtacatcaacttgcagctgatcaat
gcaaagccacaagaatgccagaaaggaacagtgggaactctcctaatggaaaaccctgtt
ggtcagaatggattaacctacaaaggtcttctgcatgagacagcaaaagtttttgggctc
agaagcaggaggctaaagttgttcctggatgaagcactaactcatgagatcacaaaggac
atttctatgaagaacctgaacatgaagaccctctatgttcatgtcatacccaccacagct
gaatgttga
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