Lonchura striata domestica (Bengalese finch): 110471003
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Entry
110471003 CDS
T05897
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03022
Basal transcription factors
lsr03420
Nucleotide excision repair
lsr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110471003
09124 Replication and repair
03420 Nucleotide excision repair
110471003
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110471003
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsr01001
]
110471003
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110471003
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110471003
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110471003
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
110471003
2.7.11.23 [RNA-polymerase]-subunit kinase
110471003
Protein kinases [BR:
lsr01001
]
Serine/threonine kinases: CMGC group
CDK family
110471003
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110471003
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
110471003
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110471003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
Kinase-like
ABC1
APH
FTA2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
110471003
NCBI-ProteinID:
XP_021386803
LinkDB
All DBs
Position
Z:complement(62166614..62185764)
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AA seq
275 aa
AA seq
DB search
MYFVLQLIDAFGHKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYMLMTLQGLEYLHQ
HWILHRDLKPNNLLLDGNGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPELLFGARMY
GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPGMTSLPDYVTFK
TFPGMPLQHIFSAAGDDLLGLLQGLFTFNPSTRVTATQALKQKYFSNRPGPTPGDQLPRP
NCPAEAAKEPQNALLNLKRKNTEGIGQGLPKKLIF
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgttttgcagcttattgatgcatttggacacaagtcaaatattagtctggtg
tttgattttatggaaacagatttagaggttattataaaggatacaagtattgtgttgacg
cagtctcacatcaaggcatatatgctgatgacacttcaaggattagaatatttacatcag
cattggattctacacagggatcttaaaccaaataacttgttgctagatggaaatggagtt
ttaaaattggctgactttggcttggcaaaatcttttggaagcccaaacagagtttataca
caccaggtagtaacaaggtggtaccgagccccagaactactgtttggggctagaatgtat
ggtgttggtgttgatatgtgggctgttggttgtattttagccgaattgctcctcagagtt
ccttttttgcctggagactctgatcttgaccagctgacaaggatttttgaaacactgggc
actccaacagaagaacaatggcctgggatgacaagtcttccagattatgtcacatttaag
acattccctggaatgccacttcaacatatcttcagtgcagctggtgatgatctgctcggt
cttcttcaaggcttattcacgtttaatccttccactagagtaacagctactcaggcattg
aaacagaagtatttcagtaaccgaccaggacccactccaggagatcagctgccaagaccc
aactgtcctgctgaagctgcaaaggagccacaaaatgcacttttaaatttaaaaagaaaa
aacacagaaggaataggtcaaggattgccaaaaaaactgattttttga
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