Lonchura striata domestica (Bengalese finch): 110475107
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Entry
110475107 CDS
T05897
Symbol
CHPF2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase isoform X1
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lsr01100
Metabolic pathways
Module
lsr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
110475107 (CHPF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsr01003
]
110475107 (CHPF2)
Enzymes [BR:
lsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
110475107 (CHPF2)
Glycosyltransferases [BR:
lsr01003
]
Glycan extension
O-Glycan
110475107 (CHPF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
110475107
NCBI-ProteinID:
XP_021394676
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All DBs
Position
2:4031966..4037169
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AA seq
760 aa
AA seq
DB search
MRLGAVLSALRPALPLLLGLSLGCSLSLLRASWSHGAAEERCLAPGPPAPPARGAPPEAA
EGRPGPGHEDFRPRIVPYYRDPNKPYKKVLRTRYIQTELGFHERLFVAVLTSKATLNTLA
VAVNKTVAHHFPRLLYFTGLRSAKVPHGMVLVAHGDERPIWLMYETVNYIHQHFGSDYDW
FYIMQDDTYAQAEQVKALVTHLSINQDVYLGRAEEFIGGDEQARYCHGGFGYLLSRSLLL
KLHPHLDSCRNEILSVRPDEWLGRCIIDFLGITCVSQLQGQHYHTYELAKNTDLEKEEEE
DFQAALAVHPVSDMTLMYRLHKQFSRIQLDRIYQEIQDLQMQIRNLTALTPAGEAGVTWP
VGINAPFLPKSRFEVISWDYFTEQHLFSCPDGSPKCELSGASKADVSEIIESAVEQLNRL
YQPLLRFSKRQLLNGYRRFDPTRGMEYTLDLLLEAATQKGHSHVLAKRVSLVRPLSKVEI
IPMPYVTEATRVQLVLPLTVQDLDFVANFLDMFAMNTLDTHDNALLTLLFIYHPYDAQRV
GQVDVFAGVKAMVGELEKRYAEVKIPWISVKTEVPSQVKLMDIVSKKHPVDTLFFLASVW
TEINMEFLNRCRMNTISNWQVFFPVHFQEFNPALVYRGEQTASSSTDFLRDGHFDRHSFA
EACFYNSDYMTARTKLAADILDRDEVLESMEVFDVFLHYSGLHLFRAVEPGLVQKYTLRS
CNPRLSEELYHRCVLSNLEGLASRSHLAMALFEQEQANST
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggcgcggtcctgagcgcgctgcggcccgcgctgcctctgctgctcgggctg
tccctgggctgcagcctgagcctcctgcgcgcctcctggagccacggcgcggccgaggag
cgctgcctggcaccgggcccgcccgcgccgcccgcccgcggggctccgcccgaggcggcg
gaggggaggccgggcccgggccacgaggacttcaggcctcggattgtgccgtattacaga
gaccccaacaagccttacaaaaaagtgctcagaactcgctacattcagacagaattggga
ttccatgagagactgtttgtggctgtgctgacctccaaggccacgctgaacacgttggca
gtggcagtgaacaagaccgtggcccaccacttcccacgcctgctgtacttcaccgggctg
cgcagtgccaaggtgccccatggcatggtgctggtggcccacggtgacgagaggcccatt
tggctcatgtatgagaccgtgaactatatccatcagcattttggttctgactatgactgg
ttctacatcatgcaggatgacacctatgcccaagctgagcaggtcaaggctctggtgaca
cacctgagtattaaccaagatgtgtacctggggcgagcggaggagttcatcgggggagat
gagcaggcccgctactgtcacgggggctttggctacctgctgtcccgtagcctcttgctt
aagctccacccacacctggacagctgtcgcaatgagatcctcagcgtgcgcccagatgag
tggctaggtcgttgcatcattgatttccttggcatcacttgtgtttcccagctccagggc
cagcattatcacacttatgaattagccaagaatactgacctggagaaggaggaagaagag
gacttccaagcagctcttgcagtgcaccctgtttctgacatgaccctgatgtaccggctg
cacaagcagttcagcaggatccagctggacagaatctatcaggagatccaggacctccag
atgcagatcaggaacctgacagcactgacccctgcaggtgaggcaggtgtgacctggcct
gtgggcattaatgcccctttccttccaaagtctcgttttgaggtgatcagctgggactac
ttcacagaacagcacctcttctcctgtcccgacggctccccaaaatgcgagctctccgga
gccagtaaggcagacgtcagtgaaatcattgagtctgcggtggagcagctgaaccgtctc
tatcagcccctgcttcgcttcagcaagcggcagctgctgaatggctaccggcgtttcgac
cccacgcggggcatggaatacaccctggacctgctcctggaggctgccacccagaagggt
cacagtcatgttctggccaagcgagtgagcttggtccgacccttaagtaaggtggaaatt
attcccatgccatatgtgacagaagccacacgggtgcaattggtgcttcccttgacagtg
caggacctggattttgtagcaaacttcctggatatgtttgctatgaacacactggacaca
catgataatgccttgctgactttgctttttatctaccatccctatgatgcccagagagtt
ggccaggtggatgtttttgctggagtcaaagccatggtaggagagctagagaaacgctat
gcggaagttaaaatcccgtggattagtgttaaaacagaggtgccatcacaagtgaagctc
atggatatagtctcaaagaagcaccctgtggacacactgtttttcttggccagcgtctgg
acagaaatcaacatggagtttctgaaccgttgccgcatgaacaccatcagcaattggcaa
gtctttttccctgtgcatttccaggagttcaaccctgcgctggtgtaccgtggtgagcag
acagcatcctccagcaccgacttcctgagagatgggcattttgacagacattcctttgct
gaggcctgcttttataattctgactacatgacagcgcgtaccaagctcgcagctgatatc
ctggaccgagatgaggtgctggagagcatggaggtatttgatgtcttcctccactactct
ggcctgcatctgttcagggctgtggagccggggctagtgcagaaatacacactgagaagc
tgcaacccccggctcagtgaggagctgtaccaccgctgtgtgctcagtaacttggaagga
cttgcatcccgctcacatttagccatggcgctctttgagcaggaacaggccaacagcact
tga
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