Lonchura striata domestica (Bengalese finch): 110476469
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Entry
110476469 CDS
T05897
Symbol
CLDN18
Name
(RefSeq) claudin-18 isoform X1
KO
K06087
claudin
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04514
Cell adhesion molecules
lsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110476469 (CLDN18)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110476469 (CLDN18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110476469 (CLDN18)
04147 Exosome [BR:
lsr04147
]
110476469 (CLDN18)
Cilium and associated proteins [BR:
lsr03037
]
Other cilia and associated proteins
Stereociliary proteins
110476469 (CLDN18)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
110476469 (CLDN18)
Exosomal proteins of colorectal cancer cells
110476469 (CLDN18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Trp_oprn_chp
DUF308
QcrA_N
Motif
Other DBs
NCBI-GeneID:
110476469
NCBI-ProteinID:
XP_021397115
LinkDB
All DBs
Position
9:24270895..24286384
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AA seq
259 aa
AA seq
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MSTTICQVMGFLVSLLGIAGSIMATAMDTWSTQDLYDNPVTAVFQYQGLWRSCVRQSSGF
TECRPYFTILGLPAMFQAVRALMIVGIVLGILGLFVCIFALKCIRIGSMEDTAKANMTLT
SGIMFIIAGLCAITGVSVFANMLVTNFWMSTTNMYQGMQNVQNRYTFGSALFVGWVAGGL
ALVGGIMMCLACKGLIPEESRYKAVSYNASGRNISYRTGPYKAGSGYEADPKTRKGVGYE
EAPRSEDGRRPYPSKYDYV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatctgccaggtgatggggttcctcgtgtcattgctgggcattgcgggg
agcatcatggccacagccatggacacgtggagcacgcaggacctgtatgacaacccggtc
acggccgtcttccagtaccaggggctgtggaggagctgcgtgcggcagagctccggcttc
acggagtgtcggccgtacttcactatccttgggctgccagcgatgttccaggctgtgagg
gccctcatgatcgtggggattgtcctgggaatccttggcctcttcgtgtgcatttttgct
ctgaaatgcatccggattgggagtatggaggacactgccaaagccaacatgaccctgacc
tctggcatcatgttcatcattgctggcctgtgtgccatcactggagtgtccgtgtttgcc
aacatgctggtcacaaacttctggatgtccacgaccaacatgtaccagggcatgcagaac
gtccagaacaggtacacctttggctcagcgctctttgtcggatgggtggcagggggcctg
gccctcgtgggaggcatcatgatgtgccttgcttgcaaagggctcatcccagaagaatcc
cgctacaaagccgtgtcctacaacgcctcgggccggaacatctcctacaggacggggccc
tacaaggctggctcggggtacgaagctgacccaaagaccaggaagggtgtgggatatgaa
gaagctcctcgaagtgaggatgggagacgcccgtacccttcaaaatatgactatgtctag
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