Lonchura striata domestica (Bengalese finch): 110477154
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Entry
110477154 CDS
T05897
Symbol
USP49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110477154 (USP49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110477154 (USP49)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110477154 (USP49)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110477154 (USP49)
Ubiquitin system [BR:
lsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110477154 (USP49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
DinB_2
Motif
Other DBs
NCBI-GeneID:
110477154
NCBI-ProteinID:
XP_021398296
LinkDB
All DBs
Position
26:68166..94986
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AA seq
678 aa
AA seq
DB search
MDRCKHVGRLRLAQDHSILNPQKWQCVECHTTESLWACLKCSHVACGRYIEEHALRHFQE
TQHPLAMEVHELYVFCYLCQDYVLNDNPEGDLKLLRSSLVAIKGQRGGRTLRSTALPEDS
WRRRSPQGQSQMLTALWHRRQALLARALRTWFHKSSRGQLKLKEKKQMEELEKKKEAARQ
RRQEMKRQLLEELASTPPRKSARLLSHVHGESLIPRKFREVATASPTSRQVQSSRLKQFY
SIRRQPLMTPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEELLAKTVNGR
ARMPGRLANGAAAHEPGKPDKAGTQSSPPGLNGGSSISRSLELIQPKEPSSKHISLCHEL
HTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLDKVQQELESEGSK
RRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCTTCNYKSNTVEPFWDLSLEFPERYHA
LEKGLLPVAQAECLLTEMLAKFTETEALEGRIYACDQCNSKRRKSSPKPLVLSEAKKQLL
IYRLPQVLRLHLKRFRWSERKHREKIGVHVLFEQVLNMEPYCCRDSEPSLASGTCVYDLS
AVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCRTQAYILFYTQRAPHR
AGIPQERLQLQEELAQDP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatagatgcaaacatgtggggcggctacgactcgcccaggaccactcgatcctgaac
ccgcagaagtggcagtgcgtggagtgccacaccaccgagtcgctctgggcctgcctcaag
tgctcgcacgtggcctgcgggcgctacatcgaggagcacgccctgaggcacttccaggag
acccagcaccccttggccatggaggtgcacgagctctacgtcttctgctacctctgccag
gactacgtgctgaacgacaaccccgagggcgacctgaagctgctgaggagctccctggtg
gccatcaaggggcagaggggcgggaggacgctgcgctccacggcgctgcccgaggactcc
tggaggaggaggagcccccagggccagtcccagatgctgacggcgctgtggcaccggcgc
caggccctgctggcgagggccctgcgcacctggttccacaagagctcccggggacagctg
aagctgaaggagaagaagcagatggaggagctggagaagaagaaggaggcggctcggcag
cggcggcaggagatgaagaggcagctcctggaggagctggccagcacgccgccgaggaag
agcgccaggctgctgtcccacgtgcacggggagagcttgatcccaaggaaattcagggag
gtggccacagcttcccctacctcaaggcaggtgcagagcagcagattgaagcagttctac
tccatccgccggcagcccctgatgacgcccggggtgacggggctgaggaacctgggcaac
acttgttacatgaactccatcctgcaggtgctcagccacctccagaagttccgagaatgt
ttcttgactcttgatctctgtgaaacggaagaacttttagctaaaactgtgaacggcagg
gccaggatgcccggcaggctggccaacggggccgccgctcacgagccggggaagccggac
aaggcgggcacgcagagctcgccacccggcttgaacgggggctcctccatcagcaggagc
ctggagctgatccagcccaaggagcccagctccaagcacatctccctctgccacgagctg
cacaccctgttcagggtgatgtggtctggcaagtgggccctggtgtcccccttcgccatg
ctgcactccgtgtggagcctgatcccggctttccgcggctacgaccagcaggacgcccag
gagttcctctgcgagctcctggacaaggtccagcaggagctggagtccgagggcagcaag
cgcaggatcctcatccccttctcgcagaggaagctcaccaagcaggtcctcaaggtggtc
aacaccattttccacgggcagctgctcagccaggtcacctgcacgacatgcaactacaaa
tccaacacggtggagcccttctgggacctttccctggaattcccagagcggtaccacgcc
ctggagaagggtttgctgcccgtggcccaggcggagtgcctgctcaccgagatgctggcc
aaattcaccgagacagaagccctggaggggaggatctacgcctgtgaccagtgcaacagc
aaacggcgaaaatcttctcccaaacctcttgttctgagtgaagctaaaaagcagttgctg
atctacagactacctcaggtcctccggctgcaccttaaacgcttcaggtggtctgagcgc
aagcaccgcgagaagatcggggtgcacgtgctcttcgagcaggtgctgaacatggagccc
tactgctgccgggactcggagccctcgctggcctcgggcacgtgcgtctacgacctctcg
gccgtggtgatgcaccacggcaagggcttcggctcaggacactacacggcctattgctac
aacaccgagggaggattttgggtgcactgcaacgactccaagctgaacgtgtgcagcgtg
gaggaggtgtgcaggacgcaggcctacatcctgttctacacccagcgagcgccgcaccgc
gccggcatcccccaggaacggctccagctccaagaggaactggcacaggacccctga
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