Lonchura striata domestica (Bengalese finch): 110477912
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Entry
110477912 CDS
T05897
Symbol
XPO5
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110477912 (XPO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110477912 (XPO5)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110477912 (XPO5)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110477912 (XPO5)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110477912 (XPO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
110477912
NCBI-ProteinID:
XP_021399793
LinkDB
All DBs
Position
3:complement(36526683..36556683)
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AA seq
1219 aa
AA seq
DB search
MSAEQVSGLCEQLVKAVTVIMDPASTQRYRLEALKFCEEFKEKCPICVPCGLKLAEKTQT
AIVRHFGLQILEHVVKYRWNNMPRLEKVYLKNNVMGLISSGTQSILEEESHIKDVLSRIV
VEMIKREWPQHWPDMLKELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPTQRRRDIQQ
TLTQNMEKIFSFLLTALQQNVSKYRCMVGAPQEQEDLTSPQKTDLAQEPKAQANCRVGIA
ALNTLAGYIDWVALSHITADNCKLLEMLCLLLNEPELQVGAAECLLIAVSRKGKLEDRKP
LMVLFGDVAMHCILSAAQTADGEGLVEKHYVFLKRLCQVLCALGSQLCALLGSDCDVETP
ANFGKYLESFLAFTTHPSQFLRSSTQITWGALFRHEVLSHDPLLLAVVPKYLRASMTNLV
KVGFPSKADSPSCEYSRFDFDSDEDFNAFFNSFRAQQGEVIRMACRLDPLTGFQMAGEWL
RYQLTAPVDTGPMNSKTGEGLCSIFSPSFVQWDAMTFFSESVISQMFRTMDKDEIPVNDG
IDLLQLVLNFETKDPLILSCVLTNVSALFPFVTYRPEYLPQVLSKLFASVTFEVVEESKF
VVSVQAPRTRAVKNVRRHACSSIIKMCRDYPQLVLPNFEMLYNHVKQLLSNELLLTQMEK
CALMEALVLISNQFKDYERQKAFLEELMAPVAGLWLSPEMQRVLSDPEAFISYVGADNKI
ADPVMEDPSGLNRSRISFCVYTILGVVKRARWPAATEEAKAGGFFLGYLPSGTPMYRNPC
TEQVLKLFDNLLALIRTHNNLYMPEMVARLGDSFAKALDMLDVEKNAILGLPQPLLELYD
SPVYKTVLERMQGFFCTLYDNCFHILGNAGPSMQQDFYTVEGLATQLLSSAFNNLNNIPD
YRLRPMLRVFVKPLVLSCPAEYYETLVCPMLGPLFTYLHMRLSQKWQVINQRSMLCEDDA
ADDNPESQEMLEEQLVRLLTREVMDLATVCCVSKKGVEQNTTAAVDGDDDEAMATEVTPP
ANAELTELGKCLMKQEDVCTAVLITAYTSLSWKDTLSCQRTTTQLCWPLLKQVLPGNLLP
DAVSWFFTSVLKGLQVHGQHDGCMAALVHLAFQIYEALRPRYGELKAVMEQIPDIQLDSL
EQFDSKLLNPTLQKTADKRRKDHFKRLISGCIGKPIGEQFRKEVHIRNLPSLFKKVKPSL
ETDVLENEDGEAFNVLFEP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgagcaggtgagcggcctctgcgagcagctggtgaaggcggtcaccgtcatc
atggacccggcgtccacgcagcggtaccgcctggaggccctcaagttctgcgaggagttc
aaggagaagtgccccatctgcgtgccctgcgggctgaagctggcggagaagacgcagacg
gccatcgtccggcacttcggcctgcagatcctggagcatgtggtcaaataccgttggaac
aatatgcctcgcttagaaaaagtttatctaaagaacaatgttatgggcctcatatccagt
ggaactcaaagtatcctggaggaggaaagtcacattaaagatgtgctgtctcgcattgtg
gtagagatgatcaagcgggaatggcctcagcactggcctgacatgctaaaggagctggat
accctctccaaacaaggggaaactcagacagaactggtgatgttcatccttctacgtttg
gcagaggatgtagtgacttttcaaactctacctacccagcggcgacgagatatccagcaa
accctcacccagaacatggaaaagatcttcagcttcctactaactgccctgcagcagaat
gtcagcaagtacagatgcatggttggagcaccccaggaacaagaagacctcacgagtcca
cagaagactgatttggctcaggaaccaaaggcccaggcaaactgtcgtgttgggatagcg
gcacttaacactttggctggctacattgactgggtagccctaagccatattacagcagac
aactgcaaactcttggagatgttgtgtctactcctaaatgagcctgaactccaagttgga
gcagcagagtgtctcttgattgctgtcagcaggaaaggtaagctggaggatcggaagcct
ctgatggtcttgtttggagatgttgccatgcactgcatcctctctgctgcccagacagca
gatggagaaggcctggtggagaagcactacgttttcttgaagaggctttgccaagttttg
tgcgcattgggcagccagctatgtgcgttgctaggctcagattgtgatgtggaaacgcca
gccaactttggaaaataccttgagtcatttttagccttcacaacccatcccagccagttt
ctgcgctcttccacccagatcacatggggagccctctttcggcatgaagttctgtctcat
gaccctttgttgctggctgtcgttcccaagtatctccgtgcatctatgaccaacctggtg
aaggtgggctttccttccaaagcagacagccccagctgtgaatactcccgttttgatttt
gatagtgatgaggacttcaatgccttcttcaactctttccgggcccagcaaggagaggta
attaggatggcttgtcgtctggaccctctaactggcttccaaatggctggtgaatggctg
aggtaccaactcacagctcctgttgatactggacccatgaactctaagacaggcgaaggt
ctctgctccatcttctctccatcctttgtgcagtgggatgccatgaccttcttctcagag
agcgtcatcagccagatgtttcgaaccatggataaagatgaaatccctgtgaatgatggc
atagatctgctgcagcttgtccttaattttgaaacaaaagatcctctcatcctgtcctgt
gtgctcaccaatgtctctgctctctttccatttgtcacttaccgaccagaatacctccca
caagtactttccaagctgtttgcttcagttacctttgaagttgtagaagaaagtaagttt
gttgtgtctgtccaggctcctagaactcgagcagtgaaaaatgtgagaaggcatgcgtgc
tcctcaatcataaagatgtgccgggattaccctcagcttgtcctgccaaactttgagatg
ttgtacaaccacgtgaaacagctactgtcaaatgagctacttctgacgcagatggagaag
tgtgctcttatggaggctcttgtcctcatcagcaaccagtttaaggactatgagcggcag
aaggctttcctggaggagctcatggctcctgtggctggcttatggctctccccagagatg
cagagagtcctctcagatcctgaagcctttatatcctatgtgggtgcagacaacaaaatt
gctgatccagtcatggaagatcctagtggcctgaaccggtctagaataagcttttgtgtg
tacaccatcctgggggttgtgaaacgagctcgttggcctgctgctactgaagaggcaaaa
gctggaggattctttttgggatacctgcccagtggaactccaatgtaccgtaatccctgc
actgagcaggtcctgaagctttttgacaatttacttgctctcataaggactcacaacaac
ctttacatgccagagatggtggctaggctgggggattcatttgcaaaggccctggacatg
ctggatgtggagaagaatgccattctaggtctccctcagcctttgttggagctttatgat
tctcctgtttacaaaacagtcttagaaaggatgcagggcttcttttgtaccctctacgac
aactgttttcacatcctgggaaatgcaggcccctccatgcaacaggatttctacactgtt
gagggtcttgccacccagctcctcagctctgctttcaacaacctcaacaacattcctgat
tacagactgcgtcccatgctccgtgtgtttgtgaagcccttggtgctttcctgccctgca
gaatactacgaaacccttgtctgccccatgctgggaccactctttacctatctgcacatg
aggttgtcccagaaatggcaggtgatcaaccagcgaagcatgctctgtgaggatgatgct
gcagatgacaaccctgagtctcaggagatgcttgaggaacagctagtcaggctgctgact
cgagaagtcatggatcttgccactgtttgctgtgtttctaagaaaggtgttgaacagaac
actactgctgctgtagatggggatgatgatgaagcgatggccacggaggtgactccccct
gccaacgcagagctcactgagcttggcaagtgtctgatgaagcaagaggatgtttgcact
gcagttctgatcactgcctacacatccctgtcctggaaggacaccttatcctgccaaaga
accacaacacagctttgctggccactgctcaaacaggtgcttccaggaaacctccttcct
gatgctgtgtcctggtttttcacaagtgtgctcaagggcttacaggtacatgggcagcat
gatggctgcatggcagctcttgtccacctggctttccagatctacgaggccttgcgccct
cgctatggtgagctgaaggcagtgatggagcagattccagacatccagctggactctttg
gagcagtttgattcaaagcttctcaacccaacactgcaaaaaacggcagacaagcgccgg
aaggatcacttcaagcgcctcatctcaggttgcattgggaagcccatcggggagcagttc
cgcaaggaggttcatattcggaaccttccatctctcttcaaaaaggtgaagccatcactg
gagacagacgtgctagaaaacgaggatggagaggccttcaatgtactctttgaaccctga
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integrated database retrieval system
