Lonchura striata domestica (Bengalese finch): 110478967
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Entry
110478967 CDS
T05897
Symbol
ATF6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110478967 (ATF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110478967 (ATF6)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
110478967 (ATF6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
110478967
NCBI-ProteinID:
XP_021401642
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Position
8:265385..338786
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AA seq
663 aa
AA seq
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MAAAEAEWEPAGLLPAPGGGLDWEAVLGEELSELLGAAAPKDEPDENDLYNFHFDLDLMS
WDSDLWNITGHAYADANVKTEPLSPATSSCSVPSPPSVDSPVQNVPDDVDFSCSSQMSPI
SLYSKSCRSPASPEGDGVKKPAVSISSRSANNSARSLKKCGQTVSRPLIQPKPLLPAVPE
AQANIGIPAKTIIIQTLPTLVPLPKNQPVVNIQPAPPKGPSVVLPQPAVVQLQASGVLPA
SQPVIAVTGGAPALQNHTVKALSPAAGSGSSSGKIPVTKPLLQSSSPAVGLDVNVLRRQQ
RMIKNRESAFQSRKKKKEYMLGLEARLEAALLENEKLKKENSTLKRQLDEVVLENQKLKV
SSPKRRMLCVMVILAFIMLNYGPLSVFEKDPNGVDSTVSNHRTRNLLEFSAHQESSTAQK
IPEGIISEKSNKYDHSVSDNKALMIVSEEPLLYISPPPPPCRPLINRTESLRLTHELRGW
VRRHEVERTRSRRLSNSQQQRARVPQSSLSDKADSQLMAMPYTDTSLSRNSGNELQVYYA
SPRSYQDFFEAIHRREDTFYVVSFRRDHLLLPATAHNKTRRPKMSIVLPAVNINENVING
QDYEVMMQIDCEVMDTRILHIKSSSVPPYLRAQRRNHTDTFYSSSPSVPEMPHALRAIVK
SLQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgaggccgagtgggagccggcggggctgctgcccgccccggggggcggc
ctggactgggaggcggtgctgggtgaggagctgagcgagctgctgggcgccgcggccccg
aaggacgagcccgacgaaaatgatctctataactttcattttgatttggatttgatgtct
tgggactcagacctctggaatattacaggccatgcttatgcagatgcaaacgtgaagaca
gaacctttatcaccagccacttccagctgttcggtcccttcaccaccatctgtggattct
ccagtgcagaatgtgcctgatgatgtggacttcagctgtagctcccagatgtctcccatc
tctctctacagcaagagctgcagaagccctgcatcccctgaaggagatggagtgaagaag
cctgctgtgagcatctcttctcgatctgcaaataattctgcaaggagcctgaagaagtgt
ggtcagacagtgtccaggcctttgatacagcccaaaccccttttgcctgctgtgcctgaa
gctcaggctaacattggtatcccagctaaaaccatcattattcagactcttcccacgctt
gtgccactgccaaagaatcagccagttgttaacatccagccagcacctcctaaaggtcca
tccgtggtgctgccccagcctgctgtggtacagctccaggcttctggggtgcttcctgcc
tcccagccagtcattgcagtcactggaggggccccagcacttcagaaccacacagtgaag
gcgctgtctcctgctgcagggagcggttccagcagcggcaaaatcccagtgacaaagccc
ttgctccaaagcagctccccagctgtggggctggatgtgaatgtcttgaggcggcaacag
cgcatgattaaaaaccgtgagtcagcctttcagtcacgcaagaaaaagaaggagtacatg
ttggggctggaggccaggctggaggcagccctgctggagaatgagaaactcaagaaagaa
aacagcacgctgaagaggcagctggatgaagtggtgttagagaaccagaagctcaaagta
tcatctccgaagagaaggatgctgtgtgtgatggtgatcctggcctttataatgttgaat
tatggtccactgagtgtatttgaaaaggatcccaatggagtagattccactgtctctaac
caccggaccagaaatctcctggaattctcagctcaccaggagtccagcacagctcagaag
atacctgagggcataatttctgagaagagtaacaagtatgaccattctgtatctgataac
aaagcactaatgatagtctcagaagaaccactgttatatatttcaccaccaccacccccc
tgccggcctctgatcaacaggacagagtcgctgaggctgacccacgagctgcgaggatgg
gtgcgcaggcacgaggtagagcgcacgcggtcccggcggctgagcaacagccaacagcag
cgagcacgagtcccgcagagctccctcagtgacaaagcagattcccagctaatggccatg
ccttacacagacaccagtctcagcaggaactcagggaatgagctgcaagtgtattatgcc
tctccaaggagctatcaagatttctttgaagcaattcaccgaagggaagatacattctat
gtggtgtcattccgcagagaccacttgcttctgccagccaccgcacataacaagaccagg
agaccaaagatgtctatagtgctgccagctgtaaacatcaatgagaatgtgatcaatggg
caggactacgaggtgatgatgcagattgactgcgaagtgatggacaccaggatcctccac
atcaaaagttcatctgtccctccatacctccgagcacagcgcagaaatcacaccgacacc
ttctacagctcgtcgccctctgtcccagagatgccccatgccctgagggccattgtcaaa
tccctgcagtag
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