Lonchura striata domestica (Bengalese finch): 110480629
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Entry
110480629 CDS
T05897
Symbol
RAB3GAP1
Name
(RefSeq) rab3 GTPase-activating protein catalytic subunit isoform X1
KO
K18270
Rab3 GTPase-activating protein catalytic subunit
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480629 (RAB3GAP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsr04147
]
110480629 (RAB3GAP1)
Membrane trafficking [BR:
lsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110480629 (RAB3GAP1)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110480629 (RAB3GAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab3-GAP_cat_C
Rab3-GTPase_cat
Motif
Other DBs
NCBI-GeneID:
110480629
NCBI-ProteinID:
XP_021404401
LinkDB
All DBs
Position
7:31811668..31831697
Genome browser
AA seq
969 aa
AA seq
DB search
MPFSLPNRFISKIEEVLNDWKLIGISSGKPLEKGIFTTGTWEEKSDEISFADFKFSVTHH
YLLQELSDKDGKEELGEDALPLPMQDLLCMNNDFPPRAHCLVRWYGLREFVVIAPAANND
AVISESKCNLLLSSISIALGNTGCQVPLFVQIHHKWRRMYVGECQGPGVRTDFEMVHLRK
VPSQYTHLAGLLDIFKTKIGCPLTPLPPVSMAIRLTFVLQDWQQYFWPQQPPDIDALVGG
EVGGLEFGKLPFGACEDPISELHLATTWPHLAEGIIVDNDVYSDLDPLQAPQWSVRVRKA
DNPQCLLGDFLTEFFKLCRRKESTDEILGRSAFDEEGKEVADITHALSKLTEPAPVPIPK
LSVTNMVHSAKKKIRKHRGVDESPLNNDVLNTILLFLFPDAADKLADVFENRASTSAGNN
PPPETEDYNLFSQFKSAPSDSLTYKLALCLCMINFYHGGVKGVAHLWQEFVLEMRYRWEN
NYLIPGLANGSPDLRCCLLHQKLQMLNCCIERKKARDEGKRGSMSDRSPGGASGDGAKGG
DHSGDNPDKEKEFGKSWESWSDSEEEFFECLSDTEDLKGNGQENGKKGAKESVNLKPEGR
LHPHGKLMLLHPGEPLYVPITQEPAPMTEDLLEEQSEVLAKLGTSAEGAHLRARMQSACL
LSDMESFKAANPGCCLEDFVRWYSPRDYIEEEVIDEKGNKVIRGELSARMKIPSNMWVEA
WETAKPVPARRQKRLFDDTREAEKVLHYLAVQKPADLARHLLPCIIHAAVLKVKEEEAVE
DISSVKKIIKQIISHSSKVLRFPSPEDKKLEEIIAQIMSVEAIIARARSLKAKFGVEKCE
NEEEKEDLQRFVNSLLEQPEVSVVGAGRGPAGSIIHKLFVNAQRLTESSDEVPGVPPPEE
ELRRSGSQEERRQGVQSEFPPPAGREVILRASLPRPAPYSKALPQRMYSVLTREDFRLAG
AFSADTTFF
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccctccctaatagatttatttcaaaaatagaagaagtactgaatgactgg
aagcttattgggatttcttcaggcaaacctctagagaagggtatatttaccacaggaaca
tgggaggagaaatcagatgaaatttcatttgcagacttcaaattctcagttacccatcat
tatcttctgcaagaactcagtgacaaagatgggaaagaagagctgggagaagatgccctt
cctctgccaatgcaggacttgctgtgcatgaacaatgactttcctcctcgagcccactgt
ctggtgagatggtatggcttacgtgagtttgtagtgattgctccggctgcgaataacgat
gctgttattagtgaatccaagtgtaacctcttgctgagttccatttccattgcactaggc
aacactggctgtcaggtgccactgtttgtgcagatccatcacaagtggcgccgcatgtac
gtcggcgagtgccagggcccgggcgttcgcacggacttcgagatggttcatctgcgcaag
gtgcccagccagtacacccatttagcagggctgctggacatcttcaaaaccaagattggc
tgccctttaacacctctgcctccagttagcatggctattcgccttacctttgtgctccag
gactggcagcagtacttctggccacagcagccaccagatatagatgctctagttggggga
gaagttggaggcctggaatttgggaagttaccatttggtgcctgtgaagatcctattagt
gagctgcatttagctacaacatggcctcacctggcagaagggataattgttgacaacgat
gtttattctgacctggatccacttcaagcaccccagtggtctgtgagagttagaaaagca
gataaccctcagtgtctattgggtgacttccttactgaattcttcaagctttgccgtcgg
aaggagtcgacagatgagatacttggaaggtctgcatttgatgaggaaggaaaagaggtt
gctgatatcacccacgcgctgtcgaagctcacggagccagcaccagtcccgatccccaaa
ttatcagtcacaaatatggttcacagtgccaagaagaagatccgcaagcacagaggtgtg
gatgagtctcctctgaacaatgatgtgctcaacaccattctcctgttcttatttcctgat
gctgctgacaaacttgcagatgtatttgaaaacagagccagcacttcagcaggaaacaat
cctcctccagagactgaagattataatctcttcagtcagtttaagtctgctccatctgac
agtctgacatacaaattagctttatgtctttgtatgataaacttctaccatggaggagtc
aaaggagtggcacatctttggcaagagtttgtgctggaaatgcgttacagatgggagaac
aactaccttattccaggattagctaatggctctccagatctgcgatgttgtttactgcac
cagaaacttcagatgctaaattgttgcatcgaaaggaagaaagcaagagatgaggggaaa
agggggagcatgtctgatcgttcacctggtggtgcttctggtgatggtgccaaaggagga
gaccactctggagataaccctgacaaggaaaaagaatttggcaagtcttgggaatcgtgg
agtgacagtgaagaggaattttttgaatgtctcagtgacacagaagatcttaaaggaaat
ggacaggaaaatggcaagaaaggagcaaaagagtccgtaaacttaaaaccagaaggtcgt
ttgcacccacatggaaaactgatgctgctgcatccaggagaacctctctacgttcccata
acacaggagccagcccccatgactgaagacctgctggaggagcagtcggaggtgctggcc
aagctggggacgtccgcagagggtgcgcacctgcgggcgcgcatgcagagcgcctgcctg
ctctcagacatggagtccttcaaggcagctaatcctggctgttgtctggaggattttgtg
aggtggtactcacctcgggactacatcgaggaggaagtgattgatgagaaggggaataaa
gtcattcggggcgagctgagtgcccggatgaagattcccagcaacatgtgggtggaggcc
tgggagacagcaaagccagtcccagctcggaggcagaagaggctttttgatgacaccagg
gaggctgagaaggtacttcattaccttgcagttcagaaaccagctgaccttgcaaggcat
ctcctgccttgtatcatccatgcagctgtactcaaggtaaaggaagaagaagcagtagaa
gatatatcttcagttaagaagattattaagcagataatatcccattccagcaaagtgcta
cggtttcctagtccagaggacaagaaattggaagaaatcattgctcagattatgagtgtg
gaagccatcattgccagggcaaggtctctaaaagcaaaatttggggtagagaaatgtgaa
aatgaagaggagaaagaagacctacaaagatttgtaaacagtctcctggagcagccagag
gtgtcagttgttggtgcaggaagaggacctgctggcagcatcattcacaagctgtttgtg
aatgctcagaggctgactgaatcttctgatgaggtccccggggtgccgccgccggaggag
gagctgcggcgctcgggctcgcaggaggagcgcaggcagggggtgcagtcggagttcccc
ccgccggcgggccgggaggtgatcctgcgcgcctcgctgccccggcccgccccctactcc
aaggcgctgccgcagcgcatgtacagcgtgctgacccgcgaggatttccgcctggccggc
gccttctcggcggacaccaccttcttctga
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