Lonchura striata domestica (Bengalese finch): 110481680
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Entry
110481680 CDS
T05897
Symbol
CAPN11
Name
(RefSeq) calpain-11
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04141
Protein processing in endoplasmic reticulum
lsr04210
Apoptosis
lsr04217
Necroptosis
lsr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110481680 (CAPN11)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110481680 (CAPN11)
04217 Necroptosis
110481680 (CAPN11)
04218 Cellular senescence
110481680 (CAPN11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110481680 (CAPN11)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
110481680 (CAPN11)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C2: calpain family
110481680 (CAPN11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
110481680
NCBI-ProteinID:
XP_021406102
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Position
3:complement(30692921..30705952)
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AA seq
705 aa
AA seq
DB search
MMPFGGMAARVERDRLRAEGLGEHNNAIKYLNQDYEALKQQCIESGTLFRDPQFPAGPSA
LGFKELGPHSSKTRGVEWKRPSELVDDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
EELLHRVVPHGQSFQEDYAGIFHFQIWQFGEWVDVVVDDQLPTKDGELLFVHSAECTEFW
SALLEKAYAKLNGCYESLSGGSTTEGFEDFTGGVAEMYDLKRPPRNMGHIIRKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTAFRDVNYRGQQEQLIRIRNPWGQVEWTGAW
SDGSAEWNNIDPDEREELQLKMEDGEFWMSFRDFMREFSRLEICNLTPDALTKDELSRWH
TQVFEGTWRRGSTAGGCRNHPATFWINPQFKIKLLEEDDDPGDDEVACSFLVALMQKHRR
RERRVGGDMHTIGFAVYEVPEEAQGMQNVHLKKDFFLRNQSRARSETFINLREVSNQIRL
PPGEYIIVPSTFEPHKEADFVLRVFTEKQSDTAELDEEISADLADEEEITEDDIEDSFKN
MFQQLAGEDMEISVFELRTILNRVISRHKDLKTDGFSLDSCRNMVNLMDKDGSARLGLVE
FQILWNKIRSWLTIFRQYDLDKSGTMSSYEMRMALESAGFKLNNKLHQVVVARYADNDMG
VDFDNFVCCLLKLETMFRFFRSMDPEGTGTAVMNLSEWLLLTMCG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgatgccctttggcgggatggctgctcgtgtggagagagaccgcttgagagctgagggg
cttggtgagcacaacaacgccatcaagtacctcaaccaggactatgaggccctcaagcag
cagtgcattgagagtggcaccctcttcagggatccccaattcccagctggcccatctgcc
cttggattcaaggagctggggccacactccagcaagacacggggagtagagtggaagcgt
ccgtcggaattagtggatgaccctcagttcatcgttggtggtgccacccggacagacatc
tgccagggggctctgggcgactgctggctgctggctgccattggctccctcacgctcaac
gaggagctcctgcaccgcgtggtgccccatggacagagcttccaggaggactatgctggc
atctttcacttccagatctggcagtttggtgagtgggtggacgtggtggtggatgaccag
ctgcccaccaaggacggggaacttctgtttgtccactcggcagagtgcaccgagttctgg
agtgctctgctggagaaggcctatgccaagctgaacggctgctacgagtcgctctcgggg
ggcagcaccaccgagggctttgaggacttcacgggcggcgtggcagagatgtatgacctg
aagcggccacctcgcaacatgggccacatcatccgcaaggcgctggagaggggctccctg
ctgggctgctccatcgatatcacaagtgcctttgatatggaagcagtgaccttcaagaag
ctggtgaagggccacgcctattcagttacagccttcagagatgtgaactaccggggtcag
caggaacaactcatccgcatcaggaacccctggggtcaggtggagtggactggagcctgg
agtgatggttccgctgagtggaacaacattgaccctgacgagagggaagagctgcagctg
aagatggaggatggagagttctggatgtctttccgagacttcatgagggagttctccagg
ctcgagatctgcaacctgacccccgatgccctcaccaaggacgagctcagcagatggcac
acacaggtgttcgagggcacatggcgccgggggagcactgccgggggctgcaggaatcac
ccagccacattctggatcaacccccagtttaagatcaagttgctggaagaagatgatgac
cctggggatgatgaggtggcctgcagcttcctggtggctctgatgcagaagcatcgacgg
cgcgagcggcgtgtgggaggtgacatgcacaccattggctttgctgtctatgaggttcct
gaggaggcccagggcatgcagaatgtgcacttgaagaaggacttcttcctgcgaaaccag
tcccgggcacggtctgagaccttcatcaacctgcgggaggtgagcaaccagatccggctg
ccccccggcgagtacatcattgtgccctccaccttcgagccacacaaggaggccgacttc
gtcctgcgcgttttcaccgagaaacagtcagacacagcggagctggatgaggagatctcg
gcagatctggcagatgaggaggaaataactgaggatgacatagaggatagcttcaagaac
atgttccagcagctggcaggggaggacatggaaatcagcgtctttgagcttcggactatt
ctgaacagagtcatctctagacacaaagatctgaaaacagatgggttcagcctggactcc
tgccgcaacatggtcaacctgatggataaagacggcagtgcccgccttgggctagtagaa
ttccagatcctatggaacaagatccggagctggctgacaatctttcgccagtatgacctg
gataagtcaggcaccatgagctcctatgagatgcgcatggctctggagtcagccggtttc
aagctgaacaacaagctgcatcaggtggtggtggcgcgctatgcagacaatgacatgggc
gtggactttgacaactttgtctgctgccttctgaagctggagaccatgttcaggttcttc
cgtagcatggaccctgaaggtactggcactgctgtcatgaacctttctgagtggctgctg
ctgacgatgtgtggctag
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