Lonchura striata domestica (Bengalese finch): 110482688
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Entry
110482688 CDS
T05897
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110482688 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110482688 (TCOF1)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
90S particles
Other 90S particles
110482688 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110482688
NCBI-ProteinID:
XP_021407787
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Position
13:11928420..11948179
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AA seq
1046 aa
AA seq
DB search
MAADGGGGGRELLALIHEHLLRGGFARAARELQAQSGQKLLPSFSTSLEDIFTHWEKTPP
NFKRRNVSDEEAAIPEKIRVPDPVSSSESSEKEEDEKEKAKAANAASISLATNSVVNIES
SEEDESSSEEEAPAGKGAVTVTAAVVGGKAANSLHSPPKPAAPAGRAEGLSAADRTVLSN
KQQPNAPAPAPSPAKAQKLPGPGKPGHATAAVAKVGQSKAPVTTTAPESSSSSSSSSESE
EEEETPTVKAPAPKAEPSAGAKSSSEESSEDTSSEEELTIPPIQAKPAVKKVQSNAAPVK
SAPVTSVSLKKNAGKQTALATSQAKPALTTVPGAAQPSDTSESSSSSDSEDEERPLVTQT
KPPPKSSQAVPSPVKPTPAASLSVKAAPAKTLPQSQGKTASKPTVPKQAEPTAAPTKPAE
SIKPVESSASSASEEEDLPVPISQKRLSDQPRPTPNVSQAAKAGQPEKAVVSTLKSQVSE
SGSSDSSDSEEESPAAQKQPPQAVKTNSVPQPTNVKKAPTSAPVTAPPAVDSSDDSSEES
DSEDEIVPPSQSVSQQNVRVTAVSSMVAAKANASLPSGKRTKTPAVPAVSRVSESSSTVA
SEHNMLAGKVPAASSQKQTVSVGKAPPANTTTPGSSIGKARKAVLQPGQDTQPNQAVPPT
HAEDTSDSSSSSDSDEEEAPKQPSKPAGSLQKPGGTQPAHSSSSESSEEEDAASQSLLTG
YPVLSKPPVTSQAPKTVPPQPGGEVGPGKAPQSAANSLAKHSLKAAPANSSSSDSSDSDT
DDNQVAANHKAENNPTSGQEATETSNKEKVAEKPEPGHASLKASSLKKTLVMKENNVGAT
GVQVTPASSHALLSVPQSQEPSSGSETEVTTAAEVPAVEGLEVKKKKKKEKKEKEKKEKK
EKEKKEKKEKEKKEKKEKEKKEKKKPSSTADKAVKTSKSKDKENKKQKTSQKRKLTGEDG
AVGQPKEKKQKGQANEEVPKKKKKKADGDLEKEAGSKETKKAAKKKKTEKEKKSKKASLE
VAAVADGSAEVHKKKKKKKGAEPEGL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacggcggcggtggcgggcgggagctgctcgccctcatccacgagcacctg
ctccgcggcggcttcgcgcgggccgcccgcgagctgcaggcgcagagcggacagaaatta
ctcccttccttctcgacctctctcgaggacatctttacccactgggaaaaaactccacca
aacttcaagagaagaaatgtgagtgatgaggaggcagctatcccagaaaagatcagagtt
cctgatcctgtgagcagttctgagagctcagagaaagaagaggatgaaaaagagaaagca
aaagctgcaaatgcagccagcatttctctggccacaaactcggtagtgaatatagaaagc
agcgaggaagatgagtcctcgtcggaagaggaggctccagctgggaaaggtgcagtgacg
gtgacagcagctgtggtgggtggaaaagctgccaactccctgcattctcctcccaagcct
gctgccccagcaggtagagcagagggcctctctgctgctgacagaactgtgctctctaac
aagcagcagcccaatgccccagcaccggctccaagcccagccaaggcccagaaactgcct
ggtcctgggaagcctggacatgccacagcagctgtggccaaagtaggacaaagcaaagca
ccagtaacgaccacagcaccggaaagttccagcagcagcagctcctcatctgagagcgag
gaggaagaggagacaccaactgtgaaggccccagcccccaaagcagagccgtcagctggg
gctaagagcagcagtgaggaatcaagtgaggacacatcctctgaggaggagctgacaatt
ccacccatccaggccaagccagctgtaaaaaaagtgcagtctaatgcagcacctgtgaaa
agtgcacctgttacttcagtgtccctgaagaaaaatgcagggaagcaaacagcactggca
acaagccaggccaaaccagcattgacaacggttcctggggctgcacagcccagtgacaca
tcagagagcagcagctcctcagacagtgaagatgaagaacgtccattagtaacccaaaca
aagccacctccaaaatcctcccaggccgtcccatccccagtgaaacctacaccagcagca
tcactctctgtcaaagcagctccagcaaaaacacttccacagtcccaagggaagacagca
tcaaaaccaacagtgccgaagcaggctgaacccactgctgctcccacaaagcctgctgaa
agtataaagccagtggagagctctgcttcgtcagccagtgaagaggaggatctccctgtg
cccatcagccagaagaggttatcagaccagcccaggcctacgcccaacgtgagccaggct
gctaaagctggtcagcctgaaaaagcagtggtaagcaccttgaaaagccaggtttcagaa
agtgggagcagtgactcgtctgacagtgaagaggagtctcctgcagcacagaagcagcct
ccacaagctgtgaaaaccaattctgtgccccaaccaacaaacgtgaaaaaggcaccaact
tcagcaccagtcacagcccctccagctgtggacagcagtgatgattccagtgaggagtca
gattcagaggatgaaatagtccccccttcccagagtgtgtcccagcagaatgtcagagta
actgcagtttcgagcatggtggctgcaaaggcaaatgccagcctgccttcagggaagagg
acaaaaacccctgctgtccctgcagtgagcagagtgtctgagagctcgagcactgttgcc
tcagagcacaacatgctggcaggaaaggtccctgctgcttctagccaaaagcaaacggtt
tctgtgggaaaagctcctcctgccaacactaccaccccaggaagttccattggtaaggca
aggaaggcagtcctgcagccaggacaggacacccagccaaaccaggccgtgccacccact
catgcagaggacacctcagacagcagcagttcctccgacagtgacgaggaggaggcaccc
aagcagccttccaaacctgcaggctccctacagaaaccaggagggacccagccagcccac
agctcctcctcagagtccagtgaggaggaggatgcagcatcacagtccctcctcacaggc
tacccagtcctctccaagcccccagtaacatcccaggcaccaaagacggttcccccccag
cctggaggtgaggtggggccggggaaggcacctcagagtgctgcaaactccctcgccaag
cactccctgaaagcagccccggccaacagctcaagcagtgacagcagtgactccgacaca
gatgacaaccaggtggctgcaaaccacaaagcagaaaacaaccccacttcggggcaggaa
gctacagaaacctccaacaaagagaaggtggcagaaaaaccagagccaggtcatgccagc
ctcaaagcttcctcactgaagaaaaccttggtgatgaaagagaacaatgttggggcaaca
ggggtgcaagtgaccccagcatcatcacatgccctgctctccgtcccacagtcacaggag
ccaagctcagggagtgaaactgaggtcaccactgctgctgaagtccctgcagtggagggg
ttggaagtgaagaagaagaagaaaaaggagaaaaaagaaaaggagaaaaaggagaaaaaa
gaaaaggagaaaaaggagaaaaaagaaaaggagaaaaaagagaaaaaagaaaaggagaaa
aaggagaaaaagaaaccatcctccacagcagacaaggctgtgaaaacgtccaagagcaaa
gacaaagagaacaagaagcagaaaacgtctcagaagcggaagctgacaggagaggatggg
gctgtggggcagcccaaggagaagaaacagaaagggcaagctaatgaagaagtacccaaa
aagaaaaagaagaaagcagatggtgacctggagaaggaggcaggcagcaaggaaacaaaa
aaagcagctaaaaaaaagaagactgaaaaagaaaagaagagcaaaaaagcatctttggaa
gtggcagctgtagcagatggctctgctgaggtgcacaagaagaagaagaagaagaaagga
gctgagcctgaaggattgtga
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