Levilactobacillus suantsaii: H3M12_00375
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Entry
H3M12_00375 CDS
T06901
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lsua
Levilactobacillus suantsaii
Pathway
lsua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
H3M12_00375
09124 Replication and repair
03420 Nucleotide excision repair
H3M12_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsua03021
]
H3M12_00375
03400 DNA repair and recombination proteins [BR:
lsua03400
]
H3M12_00375
Enzymes [BR:
lsua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
H3M12_00375
Transcription machinery [BR:
lsua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
H3M12_00375
DNA repair and recombination proteins [BR:
lsua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
H3M12_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD
DEAD_2
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
QMU08177
LinkDB
All DBs
Position
69392..71770
Genome browser
AA seq
792 aa
AA seq
DB search
MPIKLGVRDLVEFTLRTGDLGTTTNSQNTALLGAQIHRRLQKQRGNDYQKEYYLDLPLTL
VHHDYLLHGRADGVTLHDTTAEIEEIKTSDTPFDQLSANTLTLYWGQIKLYAHLLFCQLP
KLTELTLTLTYYQTDTDQVTQTTQTIDPESAKAFFQQVIDDYVAWLTLKAELRARRDPTI
QSLTFPYGQYRPGQRELAVAVYKTILSHQRLFAEAPTGTGKTISTLFPTIKAIGEGVIQR
IFYLTAKQSTRRVAEEALDLMATKGLKLKSITLTAKAKIQFPEEENLLPENNPFMLGYYD
RLKPALLDLIQHNDQLTRPVIERYARKHTLDPFEFQLDASLLCDVVIGDYNYLFDPQVHL
QRFFATADPENFFLIDEAHNLVDRSRDMYSAAISSAPLDALIDSSRDATQATPKLRRRLQ
DLRATFDDVSAPLRESRQTDTTFLTPPEAFNHDLSRLIEAIHDWLADQAQTPFTQAILDF
YFTAISYQRIGEYYDDTYRMRLTVDHTGITLKQLCLDPSAFLADSLALGHGAVLFSATLS
PLDYYQTVLGGGPKSLAYRLESPFDPHHQGLFITNYIQTTYKQRQANLANILLAIKTMID
SHQGNYLIFLPSYSYLLTVKQAFSLAYPQVATIAQEAQMTEAARHDFLAAFQPHPNQTLV
GFALLGGIFAEGIDLQADRLSGVGIVSVGLPGISPENDLIRDYFDQQGQPGFAFAYQLPG
VNNVFQAAGRLIRGAKDVGVVLLMDQRFATTRYTSLYPQHWQHYQRLFRPEQLQPALQQF
WAGVTNPLSGES
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcaaacttggggtgcgcgacttagtcgagttcaccttacgaaccggcgatctc
gggaccaccacgaacagtcagaataccgctttactcggtgcccagattcaccggcggctc
caaaaacagcgcggcaacgactatcaaaaagaatattatctggatctccccctcacactg
gtccaccacgactatctcctccacggcagggccgacggggtcaccctgcacgacaccacg
gccgaaatcgaagaaatcaaaacttcagacaccccgtttgaccaactgagtgccaatacg
ttgacgttgtactgggggcaaatcaagctttacgcgcacctgctcttttgccaactaccc
aagctcaccgaacttaccctgactttgacttactaccagaccgacacagaccaggtgact
cagaccacccagaccatcgacccggagagtgccaaggccttcttccagcaagtcatcgat
gactacgtggcctggttgaccctcaaggccgaattaagggcccgccgtgaccccacgatt
caaagtttgacctttccatacgggcagtaccgtccgggccaacgcgaattagccgtagcc
gtttacaaaacgattctcagtcaccaacggctttttgccgaagcgccgaccgggacgggc
aagaccatttcgaccctgtttcccaccattaaagccatcggcgaaggcgtcatccaacgc
atcttttacctgacggccaagcaaagtacccgacgcgtggccgaagaagccctcgactta
atggcgactaagggactcaagctcaagagcatcaccctcacggccaaggccaagattcaa
tttcccgaagaagagaacctgttgcccgaaaacaacccgttcatgttgggttactacgac
cgcctcaaaccggcgttactcgacttgattcaacacaacgaccaactgactcggcccgtc
atcgaacgctatgcgcgcaaacatacgctcgatccgtttgaatttcaattggacgctagt
ctcctttgcgacgtggtcatcggggactacaactatctgttcgacccgcaagtccacctt
cagcggttcttcgccacggccgaccccgaaaacttctttttgatcgatgaagcccataat
ttggtggaccgctcccgcgatatgtactcggcagccatcagcagtgcgccactcgacgcg
ctaatcgacagcagtcgtgacgcgactcaggccactcctaagctacgccggcgcctgcaa
gatctccgggccaccttcgatgacgtcagcgcgccgctgcgggaaagtcgccagaccgac
accacctttctgacgccgccggaagccttcaaccacgatcttagtcggctcatcgaagcc
atccacgattggctggctgaccaagcccaaacgccgtttacccaggcgattttggacttc
tactttacggccatcagctaccaacgtatcggggaatattatgacgacacctaccggatg
cgtttgacggtggaccacaccggcatcactttgaaacaactctgcttggaccccagtgcc
tttttggctgacagtctggcattgggccatggcgccgtgcttttttccgccacgctctcc
ccgcttgattactaccagaccgtcctagggggcggccccaagagcctagcttaccgcctc
gagtcgccttttgatccgcaccaccagggattgttcattaccaattacatccaaacgact
tacaagcaacgccaagctaacctggccaatatcctgttagctatcaaaaccatgatcgac
agtcatcagggtaactacctgatttttttgccgtcgtacagttatctcctgacggttaaa
caagcctttagcctggcctatccgcaagttgcaacgatcgcccaggaagcgcagatgacc
gaagcggcacggcatgatttcttagcggcctttcaaccgcatcctaaccaaaccttagtt
ggctttgcgctcctgggaggcatcttcgccgagggaatcgacttgcaagctgaccggcta
agtggtgtcggtatcgttagcgtggggcttcctggaatcagccccgaaaacgacctgatt
cgcgactatttcgaccagcaagggcaacccggctttgcctttgcctaccaattgcctggg
gtgaacaacgtctttcaagccgctggacgcctgattcgcggggctaaagacgtcggtgtc
gtcttgctgatggaccaacgtttcgccaccacccgttacacgtcactttacccgcagcat
tggcaacactaccagcgcctgtttcgtcccgaacaattgcaaccggcactccaacaattt
tgggccggcgtgaccaacccgttgtccggggaatcctaa
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