Lactuca sativa (garden lettuce): 111880807
Help
Entry
111880807 CDS
T05352
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111880807
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111880807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
Motif
Other DBs
NCBI-GeneID:
111880807
NCBI-ProteinID:
XP_023733007
LinkDB
All DBs
Position
3:308349920..308354160
Genome browser
AA seq
602 aa
AA seq
DB search
MGVGGNFWDILKPYARTEGFDFLRNKRVAIDLSYWIVQHETAIKVHTRNPHLRLTFFRTI
NLLSKFGAFPVFVADGTPSPLKSHARIMRFFQASGIDPASLPISNGTSVERNKKFSKCVQ
ECVELLELFGIPVLKASGEAEGLCAQLNREGRVDACITSDSDAFLFGAKCVIKHINPNSQ
EPFECYEMSDIEGGLGLKRKHLIAIGLLVGNDHDSKGVQGIGIETALSFVKSFNEDEVLD
RLCALGSGDMLSMMGYKGDSVINLDENSTKIKLSHCSLCGHPGSKRSHLKDSCEVCSSSN
NHKGCVQKPIGFKCDCLSCHQDKKEKEQKKNEAWKMRVCNKIASEPNFPNNAIIQMYLSN
NHTNFTDAEPFISWKNPNTEMLIDYIGYKLNWEPSFTRQKLFPLLSTIFLRNKAKNQETG
LLHGQYEFDFIQRTKTRLGHMLYVVTWTKHGQIVNTHIPTTPLEDSQVQEYDDDDDDDDD
DDDIDESVNNVCVDIDNECVMTDENMDLVMAAYPQKVNQFIQQKELKESKSKKKGRAKST
STPEKSLSPSSRSVQLSIKEFYRSSKGESMEKLKDNDSSTTVKRNVTRGNFSKSARRRLL
FD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttggcgggaatttctgggatatacttaaaccctacgcgcgaacagaagggttc
gattttctaagaaacaaaagggtagccattgatctatcgtattggattgttcaacatgaa
acagcaattaaagtacacactcgaaaccctcatctcagactcacattcttccgaactatc
aatctgctttccaagtttggtgcttttccggtgtttgtggcagatggaaccccatcacca
ttgaagtctcatgcaagaattatgagattctttcaagcatctggtattgatcctgcaagc
ttaccaatatcaaatggtacttctgttgagagaaataaaaagttctcaaaatgcgttcaa
gaatgtgtggagttgcttgaactttttggaatccctgttttgaaagcaagtggtgaagct
gaaggactttgtgcacaattaaatagagaaggtcgtgttgatgcttgtattacttctgat
agtgatgcttttctatttggcgccaaatgtgttattaagcacatcaaccccaattcacag
gagccatttgagtgttatgagatgtcagatattgaaggtggattaggattaaagagaaaa
catttaatagcaattggtcttttggttggaaatgatcatgattccaaaggagtccaaggg
attggaatcgaaactgcactttcatttgtcaaatctttcaatgaagatgaggttttagat
aggttatgtgcattaggaagtggagacatgctttctatgatggggtacaagggcgattcc
gtcattaatttagatgaaaactcaacgaaaataaagttatctcattgttcattatgtggg
catcctggaagcaagagatctcatcttaaagattcttgtgaagtttgcagttcaagtaat
aatcacaaaggttgtgtgcaaaaaccgattggatttaaatgtgattgcttatcatgtcat
caggataagaaagaaaaggaacaaaagaagaatgaagcttggaaaatgagagtatgcaat
aaaatcgcctcagagccaaactttccaaataatgcaatcattcaaatgtatttaagcaac
aaccacaccaatttcactgatgcagaaccatttatatcatggaaaaatccaaacacggaa
atgctgattgattatataggttataagctaaattgggaaccctcttttacacgacaaaaa
ctctttccacttttgtccaccattttcttgagaaataaagccaaaaatcaagaaaccgga
ttattacatggacaatacgagtttgacttcattcaaagaacaaagacaagattgggtcat
atgttgtatgtggtcacttggacaaaacatggtcaaatagtcaacactcatatccctaca
acacctttggaagattctcaagttcaagaatatgatgatgatgatgatgatgatgatgat
gatgatgacattgatgaatcggttaataatgtttgtgttgatattgataatgagtgtgtg
atgactgatgaaaatatggatcttgttatggctgcatatccgcaaaaggttaatcaattt
atacaacaaaaggagttaaaagaatcaaaatcgaagaaaaaaggtagagcaaaatctaca
tcaacacccgagaaatcattatcaccatcatcaagaagtgttcaacttagtataaaagaa
ttttatcgttcatctaaaggtgaatctatggagaagttgaaagacaatgattcttctact
acagtgaaaaggaatgttacaaggggtaatttctcaaaatctgcaaggcgtcgcttgctt
tttgactag
DBGET
integrated database retrieval system
