Lactuca sativa (garden lettuce): 111882528
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Entry
111882528 CDS
T05352
Name
(RefSeq) protein RNA-directed DNA methylation 3
Organism
lsv
Lactuca sativa (garden lettuce)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Spt5-NGN
zf-CCHC_3
KOW
Motif
Other DBs
NCBI-GeneID:
111882528
NCBI-ProteinID:
XP_052624616
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All DBs
Position
2:complement(207793357..207800335)
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AA seq
1349 aa
AA seq
DB search
MADKGKGIADDYSSGKRKHDGDDKSAYRKRKNLNVLQFFEDAALENEESDSSDDDVFIND
VFLEDDFGPDIEVKAEPKTPNIPFFPKEEEMDVDEMEKILEERYKPGSTFVRYAEDQTTE
APKSDEKNTYMLYSMDPTIWKVKCMVGRERHSAFCLMQKYVDLKALGTKLQIVSAFAVEH
VKGFIYIEAEKQSDINEACKGLCNIYPSRVARIPASDVPHLFSVRSTYSGVKVDTWARVK
NGKYKGDLAQVVSVNVTGAQKKVTVKLVPRIDLEAVAEKFGGGVNGKKKTIPAPRLIPSS
ELEAYRPLVQYRHDRQTGDTYEVFDGMTLKDGYLYKKVPLDSLSFWDVRPTEAELIKFMP
ANKEESNDVEWLTGLFGERKKKKQTVNNDKTGEKGEGSSSMENSFEVPDLVFHGRKSFGI
VIGREKDDRIKILEEGTERMVVVAVEARLLKKADFDKKFNALDQHKKIIYMNDTVRVLEG
PLEDKRGIVKQIYKGVVFVYDETLQENCGYFCAKAQICEKMASSMDSYKGKGGKSGGSGF
DDVPSSPKSPLSPKKPFEGIDNNRNFEDKEGFSVGQSLRIRVGPLKGYMCRVMAIRYSDI
TVKLDSQHKILTVKAEHLAEVKGKSSGVSTGDGQDSAKPFDMLGEPGSSQGWMDGGAASE
PGGGGGGWNTGGQTTERSSWAPFPAAAGSSLQPESGSANLFGSTDNDASKDGGDSAWGAA
AASEKKEAGGGWGASSSGAKTENSDEGGWGKAAAAAAGEKKPAWGSAAAPATETGGWGSN
AGGSNDGEGKSAWGSAAAAAPVTETGGWGANAGGSNDGPGKSAWGSAAVAAPATETGGWG
ANAGGSNDGAGKSAWGSAAAAAPATETGGWGSNAGGSNDGAGKSAWGSAPATGSGGWDAA
TKKDEDAGGSSWGKKVSDGGAGGGWGKSVSVTGGESGKWGGSADKEAEGGSGWGNKKDEG
GSSWGKAGGGGGSSWGNQDGGSSWGKQDGGGGGGRGGSQGGRGSGGCFKCGESGHMSREC
PQGGGGGGGKSCFKCGESGHMSRECPQGQGGGGGGGGRSCYKCGESGHMSRECPQGGGGG
GGGGNCYKCGESGHMSRECPQGGGGGAGGGRNCYKCGESGHMSRECPQGGGGGGGGGGPK
SCFKCGESGHMSRECPQGGGGGGGGGPKSCFKCGETGHMSRECPQGGGGGGGGGGRNCYK
CGESGHMSRECPQGGGGGGGGGGRSCYKCGESGHMSRECPQGGGGGGGGGWGSSGGWSSG
NQTGGGWGSKQASDAGEKKRDAQGSGWGGGGGGAGGGGWGGSSKTSDAQGSGWGGGGGDQ
TGGGGWGSNKKNDDAAAEGSGGWKKGGWS
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagggcaaagggatcgctgatgattattcatcagggaaacggaagcacgat
ggagacgataaatctgcttaccggaagagaaaaaacctcaatgtcctccagttcttcgag
gacgccgctttagaaaacgaggagagcgattctagtgacgatgacgtttttataaatgac
gtgtttcttgaagatgactttggcccagatattgaagtcaaggctgaaccaaagactcct
aacattcctttttttccaaaagaagaggagatggatgtagatgagatggagaaaatctta
gaagagcgttataaaccaggttctacttttgttagatacgcagaagaccaaactaccgaa
gctccaaagtcggatgaaaagaacacatatatgttatattcgatggatccaacaatctgg
aaagtcaaatgcatggttggaagggagaggcattcggctttttgcctcatgcagaagtat
gttgacttgaaagctcttggaactaagctacaaatagtttctgcatttgctgttgagcat
gtgaagggctttatttacattgaagctgaaaagcaatctgatattaatgaggcatgtaaa
ggtctttgcaatatatatccaagccgagtggctcgtattccagcttctgatgttccacat
ttgttctctgttcgaagcacttacagtggggtaaaagtggacacctgggctcgtgtgaaa
aatgggaaatacaagggagatctagcacaggttgtgagtgtgaatgtgactggagctcag
aagaaagttactgttaagcttgtcccaagaatagacctagaagctgttgctgaaaaattt
ggtggaggagttaatgggaagaaaaaaacaataccagctcctagattgattccttccagt
gaacttgaggcatatcgaccactagttcaatataggcatgatcgtcaaactggagataca
tatgaggtttttgatggaatgacactgaaagatggttacctttacaaaaaagtgccattg
gattcattgagtttctgggatgtcaggcctactgaagctgagcttataaagtttatgcct
gccaataaagaagaatccaatgatgtagagtggcttactggactttttggtgaacgtaaa
aagaaaaaacaaacagtaaataacgataaaacaggtgaaaaaggagaggggagctccagc
atggagaatagttttgaagttcctgatcttgtgttccatggtcgcaagtcatttgggatt
gtaattgggagagagaaggatgaccgcattaagattttggaggaaggcacagaacggatg
gtggtagtggcagttgaagctcgtttgttaaagaaggctgattttgataagaaattcaat
gccttggatcaacataaaaagatcatatatatgaatgacactgtgagggtcttggaaggt
ccactagaggataaacgaggaattgtcaagcaaatatacaaaggggttgtgtttgtatat
gatgagactctacaggaaaattgtggttacttttgtgccaaggcacagatctgtgaaaag
atggcatcttctatggattcttataaaggaaagggtggtaaatcaggtggctctggtttt
gatgatgtcccatcatcacccaagtcccctttatcacctaagaaaccttttgaagggatt
gataataaccgcaactttgaagataaagaaggtttctctgttgggcagtcattgagaata
cgtgtgggccccctaaagggatacatgtgccgtgtcatggcaattcgatattcagatatc
actgtaaagcttgattcccagcacaagattctgacagttaaagctgagcatcttgctgag
gttaaaggaaaaagttctggggtttccactggggatgggcaggattctgcaaagccattt
gatatgctcggtgagcctgggagttctcaaggatggatggatggaggagcggcatctgag
cctggaggtggtggtggagggtggaataccggaggccaaactactgaaaggagttcttgg
gcaccttttcctgcagcagcaggatcatcacttcaaccagaatctggttctgcaaatctt
tttggttccacggataatgatgccagtaaagatggtggagattctgcatggggtgcagct
gctgctagtgaaaagaaagaagctggtggtgggtggggagcgagttcaagtggtgctaaa
actgaaaattcagatgagggaggatggggaaaggctgctgctgctgctgctggtgagaag
aagccagcttggggttcagctgctgcacctgcaactgaaactggtggatggggcagcaat
gctggcggtagtaacgatggtgaagggaagtcagcttggggctcagctgctgcagctgca
cctgtaactgaaactggtggatggggtgccaatgctggcggcagtaatgatggtccgggg
aagtcagcttggggatcagctgctgtagctgcacctgcaactgaaactggtgggtggggt
gccaatgctggcggcagtaacgatggtgcagggaagtcagcttggggctcagctgctgca
gctgcacctgcaactgaaactggtggatggggcagcaatgctggcggcagtaatgatggt
gcagggaagtcagcttggggttcagctcctgcaactggaagtggtggatgggatgccgcc
acgaaaaaggatgaggatgctgggggatcttcatggggtaagaaggtttcagatggtggg
gctggtggtggttgggggaaaagtgtgtctgtgactgggggtgaatctggaaagtggggg
ggaagtgctgacaaggaagctgaaggtggatctggttggggtaataaaaaagatgaaggg
ggatcatcatggggtaaggcaggtggtggaggggggtcttcatggggtaatcaagatggt
ggatcttcttggggcaagcaggatggaggtggtggtggtggcagaggtggtagccaagga
ggccgtggcagtggtggctgttttaagtgtggtgagtcggggcatatgtctcgggagtgc
ccacagggtggcggtggaggtggcgggaagtcttgctttaaatgtggtgagtcagggcat
atgtctcgagaatgcccccagggtcagggtggtggtggtggtggcggtggcagaagttgc
tacaaatgtggtgagtcggggcatatgtctagagaatgcccacagggtggtggcggtgga
ggcggtggtggaaactgctacaagtgtggtgagagtgggcatatgtctagggaatgcccc
cagggcggtgggggtggagctggaggtggcagaaattgctacaaatgtggtgagagtggg
catatgtccagggaatgccctcagggcggcgggggtggtggcggcggcggcggaccaaaa
tcttgtttcaaatgtggagagagtgggcatatgtctcgggaatgccctcagggtggcggg
ggtggtggtgggggtggcccaaaaagttgtttcaaatgtggtgagacagggcatatgtct
cgggaatgcccacagggcgggggtggtggtggaggtggaggtggcagaaattgctacaag
tgtggtgagagtgggcatatgtctagagaatgccctcagggtgggggcggtggcggtggt
ggtggtggcagaagttgctacaagtgtggtgaaagcggtcatatgtctcgggaatgccca
caaggtggtggtggtggtggtggtggtggttgggggtcttcaggaggttggagcagtggt
aatcaaacagggggtggctggggaagtaagcaagcctcagatgcaggtgagaagaaacgt
gatgcacaaggaagtggatggggcggcggcggtggtggtgcaggaggaggaggttggggt
ggtagttcaaagacttctgatgcacaaggaagtggctggggtggtggcggcggcgatcaa
acaggaggaggaggatggggttctaataagaagaatgatgatgcagcagcagaaggaagt
ggtggctggaagaagggaggatggtcataa
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