Lactuca sativa (garden lettuce): 111889783
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Entry
111889783 CDS
T05352
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111889783
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111889783
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111889783
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111889783
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
111889783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_16
AAA_5
AAA_22
BrxC_BrxD
AAA_19
ABC_tran
AAA_25
NB-ARC
Motif
Other DBs
NCBI-GeneID:
111889783
NCBI-ProteinID:
XP_023741704
LinkDB
All DBs
Position
9:189105706..189106919
Genome browser
AA seq
351 aa
AA seq
DB search
MSDVKENKGGVFFVYGYGGTGKTFLWKTISATIRSNGNIVLNVASSSIALLLLPGGRIAH
SRFILPFEPTEDSFCKLNPNGELASLLRKASLIILDEAPMVHKHAFEALDRTLKDVLRCG
NSSISNIPFGGKVIVFGGDFRQIMPVVLGGREGKLDGPNDGETIIDIPDDILINDPDDLI
GSLIEFVYPSILEKYSSTNYFQEGAILAQKNEVVQEINDRLLKKFPGDEVEYLSSDSICE
SEFVNDQFDANLYSPDVLNGLKVSGFPIKNLVLKNGVPVMLLRNIDKKNGLCNGTRLQGI
SLDKRVIEARILSGTNIGNRKFIPRMSLTPSEKKIRSNSQEDSFLCSSVLQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttaaagaaaataaaggaggtgtcttcttcgtttatggttatggtggaacg
ggtaaaacttttttatggaagacaatatctgcaacaattagatctaatggtaatattgtt
ttaaatgttgcttcaagcagtattgctttgttattattgcctggtggtagaatagcacac
tctcgatttatacttccatttgaacctacagaggattctttttgtaaattaaatccaaac
ggtgagttggctagcttattaagaaaagcctctttaataattttggatgaagcacctatg
gtccataagcatgcatttgaagctttagatcgaactttgaaagatgtattaaggtgtgga
aattcaagcatctcaaatattccatttggagggaaagttattgtctttggaggagatttt
agacagattatgcctgttgttctgggtggcagagaaggcaaactcgatggtccgaacgat
ggtgaaacgattatcgatattccagatgatattctcattaatgatccagatgatcttata
ggttcgttaattgagtttgtatatccttcaattttggagaagtatagtagtacaaattat
ttccaagaaggagcgatacttgctcaaaagaatgaagttgttcaggaaataaatgaccgt
ttgcttaagaaatttccaggagatgaggttgaatatttaagttcagatagcatatgtgag
tctgaatttgtcaatgatcaatttgatgcaaatttatactctcctgatgtattaaatggt
ctcaaagtatccggtttccctattaaaaatttagttttaaaaaatggtgttccagtaatg
ttactgagaaatattgataagaaaaatggtttatgtaatggcacacgactacaggggata
tcattggacaaacgtgttatcgaggcacgtatattatctggaactaatattggaaatcgg
aagtttattccaagaatgtctttaactccatcagaaaaaaaaattcgttcaaattcacaa
gaagacagtttcctttgttcgtctgttttgcaatga
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