Lactuca sativa (garden lettuce): 111895839
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Entry
111895839 CDS
T05352
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111895839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111895839
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111895839
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111895839
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111895839
BRCA1-C complex
111895839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
FHA
BRCT_2
PTCB-BRCT
Yop-YscD_cpl
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
111895839
NCBI-ProteinID:
XP_023747665
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All DBs
Position
3:complement(96932576..96936480)
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AA seq
525 aa
AA seq
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MVWGLFPADPLPGEETYYFFSKGTYKVGRKGCDIIVNKDKGVSRVHAEIIIDAMISIDNI
KKKSSKIRIKDCSKYGTFITKPLGSQKEKVHEFPNKETTLDDEDLVSFGTGSATYRFSFI
SIVFFLCGFDSSRLKQLKEKISSIGASMSNTWSPKCTHVVLDDNASVNGVLIDAIMSKKH
FVSYKWIESLADKRIDTKIPICNSDPHTLILQGVSVKIANIESRENCLNGYTFLLESSEK
YKVKEKLQPLLETFGAKVIPVEEFIPQSQGVEEDENNHVVHVISVEEGFECTHIITSLPK
VSEINLICATLSGHLDPLVFVSPPEHVTSSCSTDETIVADSEPEIEVISVSTSCKSQKLE
SFEDEKGKISFVHNVESVQHEVETIVHDPIDPIKADEYINIATNDTKDDEITPVNGISDV
IFSQDLIIRDTNLPSSLPSPTKNQVLDFKRFKKMETQSGNSFYNLVPFSKNPYKGSEYEN
EGVAESVKEEKKRKQSEAIADDLFNNAKAKKRGAAGIIQGLFNRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggcctctttcccgccgacccccttccaggcgaagaaacttattacttcttt
agcaaagggacatataaagtggggcgaaaaggatgtgatataatcgttaataaagataaa
ggggtttctagggttcatgcagaaataatcattgatgccatgatttccattgacaatatt
aaaaagaaatcatccaaaattaggattaaagattgctcaaagtatggaacttttattaca
aagcctcttgggtctcaaaaagaaaaagttcatgagtttccaaataaggaaacaacatta
gatgatgaagaccttgtttcatttggaactggtagtgccacttacaggtttagttttatt
tccattgtgttttttctttgtggatttgactcttcgcgattaaaacaacttaaagaaaag
atatcatcaattggtgcttctatgagtaatacatggagcccaaagtgcacacatgttgtt
cttgatgataatgcttcagtaaatggtgttcttattgatgctattatgtctaaaaaacat
tttgtcagttataaatggatagagtcacttgcagacaaacgtattgacaccaaaattccc
atctgcaattctgatcctcataccttgatattgcaaggagtttctgttaaaattgctaac
attgaatctagagaaaattgtttaaatggatacacttttcttctggaatcatcagaaaag
tataaagttaaggaaaagttgcaaccattacttgaaacatttggtgcaaaagttattcct
gttgaagaattcattccccaaagccagggtgtagaagaagatgaaaacaatcatgttgta
catgtcatctctgttgaagagggttttgagtgtacacatattattacatctttaccaaaa
gtgagtgaaattaatttgatttgtgctactttatctggacacctggatcctcttgttttt
gtatcaccacctgaacatgtcacatcttcatgctccacagatgagacaattgtagcagat
tcagagccagaaatagaagtcatatcagtttcaacatcttgtaaaagtcaaaaattagaa
tcttttgaagatgaaaaagggaaaatatcctttgttcataatgtggaatctgttcaacat
gaagtggaaactattgttcatgatccaatagatccaataaaagccgatgaatacataaat
atagccacaaatgatacaaaagatgatgaaattacacctgtaaatgggatttcagatgtt
atttttagccaagatttgatcattcgagatacaaatttaccatcttctctgccttctcct
actaaaaaccaagttttggactttaaacgatttaaaaagatggaaactcaatcaggaaat
agtttctacaatcttgtgcctttttcaaagaatccttacaaagggtctgaatatgagaat
gagggagtagcggagtctgtgaaggaagaaaaaaagcgtaaacaaagtgaggctattgca
gatgatttattcaacaacgctaaggccaagaagcgaggagcagctggtattattcagggg
ctatttaatcgaagatga
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