Lactuca sativa (garden lettuce): 111913233
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Entry
111913233 CDS
T05352
Name
(RefSeq) ras-related protein RABF1
KO
K07889
Ras-related protein Rab-5C
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
lsv04145
Phagosome
lsv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111913233
04145 Phagosome
111913233
04148 Efferocytosis
111913233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111913233
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111913233
04031 GTP-binding proteins [BR:
lsv04031
]
111913233
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
111913233
Endosome - Lysosome transport
111913233
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111913233
Exosomal proteins of other body fluids (saliva and urine)
111913233
Exosomal proteins of colorectal cancer cells
111913233
Exosomal proteins of bladder cancer cells
111913233
GTP-binding proteins [BR:
lsv04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
111913233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
111913233
NCBI-ProteinID:
XP_023764723
LinkDB
All DBs
Position
8:complement(28034643..28037071)
Genome browser
AA seq
199 aa
AA seq
DB search
MGCSSSLPDRSVGRVGGLNPDGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVGVIVYDITNPDSF
HKAQYWVKELQKHGSPDIVLALVGNKADLQEKREVSVQDGIEYAEKNGMFFIETSAKTAD
NINQLFEEIAKRLPRPSAS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcctcctcccttccagataggagtgttgggcgggtgggtgggcttaatccc
gacggcggagattctgatgccaaaaatctacgtgttaagctggtgctattaggggactct
ggtgttgggaaaagctgcattgttcttcgctttgttcgtggtcagtttgatccaacatcc
aaggtcactgttggagcttcattcttgtcacaaacaatcgctctccaagattctacaaca
gtaaaatttgaaatctgggatactgctggccaagagagatatgcagctttggctccactt
tattaccgaggtgcagctgttggagttattgtatatgatataactaatcctgactcattc
cataaagctcaatattgggtcaaggaactacaaaaacatggtagcccagatattgtatta
gctttagttggaaacaaagctgatcttcaagaaaaacgagaggtgtcagttcaagatgga
atcgagtatgctgaaaagaatggcatgttcttcattgaaacttctgccaaaacagctgat
aacatcaatcagctatttgaggaaattgcaaagcgattaccacgaccttctgcatcttga
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