KEGG   Lactuca sativa (garden lettuce): 111913233
Entry
111913233         CDS       T05352                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07889  Ras-related protein Rab-5C
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
lsv04145  Phagosome
lsv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111913233
   04145 Phagosome
    111913233
   04148 Efferocytosis
    111913233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111913233
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111913233
   04031 GTP-binding proteins [BR:lsv04031]
    111913233
Membrane trafficking [BR:lsv04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111913233
 Endosome - Lysosome transport
    111913233
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111913233
  Exosomal proteins of other body fluids (saliva and urine)
   111913233
  Exosomal proteins of colorectal cancer cells
   111913233
  Exosomal proteins of bladder cancer cells
   111913233
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111913233
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 111913233
NCBI-ProteinID: XP_023764723
LinkDB
Position
8:complement(28034643..28037071)
AA seq 199 aa
MGCSSSLPDRSVGRVGGLNPDGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVGVIVYDITNPDSF
HKAQYWVKELQKHGSPDIVLALVGNKADLQEKREVSVQDGIEYAEKNGMFFIETSAKTAD
NINQLFEEIAKRLPRPSAS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctcccttccagataggagtgttgggcgggtgggtgggcttaatccc
gacggcggagattctgatgccaaaaatctacgtgttaagctggtgctattaggggactct
ggtgttgggaaaagctgcattgttcttcgctttgttcgtggtcagtttgatccaacatcc
aaggtcactgttggagcttcattcttgtcacaaacaatcgctctccaagattctacaaca
gtaaaatttgaaatctgggatactgctggccaagagagatatgcagctttggctccactt
tattaccgaggtgcagctgttggagttattgtatatgatataactaatcctgactcattc
cataaagctcaatattgggtcaaggaactacaaaaacatggtagcccagatattgtatta
gctttagttggaaacaaagctgatcttcaagaaaaacgagaggtgtcagttcaagatgga
atcgagtatgctgaaaagaatggcatgttcttcattgaaacttctgccaaaacagctgat
aacatcaatcagctatttgaggaaattgcaaagcgattaccacgaccttctgcatcttga

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