Lachancea thermotolerans: KLTH0D06578g
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Entry
KLTH0D06578g CDS
T01117
Name
(RefSeq) KLTH0D06578p
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lth
Lachancea thermotolerans
Pathway
lth03082
ATP-dependent chromatin remodeling
lth03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
KLTH0D06578g
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
KLTH0D06578g
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lth01009
]
KLTH0D06578g
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0D06578g
03036 Chromosome and associated proteins [BR:
lth03036
]
KLTH0D06578g
Protein phosphatases and associated proteins [BR:
lth01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
KLTH0D06578g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
KLTH0D06578g
SWI/SNF complex
KLTH0D06578g
Chromosome and associated proteins [BR:
lth03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
KLTH0D06578g
PBAF complex
KLTH0D06578g
SWI/SNF complex
KLTH0D06578g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
8295238
NCBI-ProteinID:
XP_002553007
UniProt:
C5DGM7
LinkDB
All DBs
Position
D:572515..574866
Genome browser
AA seq
783 aa
AA seq
DB search
MNNLQTNPFANIGTTSFSLSQVPQHILQNLTPVQLQMIQQKHQQLLMERQALMQQQQQQQ
QQQQQQQQQQQQQPQHHQNQQHPSMSQRHQPGELPQHQRQHQHQQQQQQHHLHQQQQQHQ
LKQQQQQQQLQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQITANAGQSTALPQQ
LNLAQRAQILKAKQQQLDTNQQQAASTPTGVPALNLPPQIAQLPPHVQQRVLNNLKQQAA
AKNNPAAVAAITAAQQQLAGRMSNHQSPTPPSAQFPQQPIPQTPGLPTPPVPQASVPLPK
FQTIFQDPPERQMSSHSHWSDKIERGELDIKEPDSNLLIYEQTLKRDRENGEQLIKERTG
YEPFSKYGFSHKEYLTRLLQDLNYIKEVKAARMKSITATTQGLVSKSIWGDGYSGYGNGF
SNTVTSVSTGQTGPDGRQSTHYNVGEIYQQAMYESHEELVPVRLEFDAERDNFSLRDVFV
WNKNEKIIKIEELVTEMLRDYRFARNDQFFETVVQSIKEQINEFQPDPFLENEGDRFGGD
DLRIKIQLDIVVGQNQLMDAFEWDISNPSNSPEEFAETLSQELELPGEFSTAIAHSIREQ
VHMYHKSLSLTCYQFDGSTVEDEDIRSRLLPLVTLNEVFRNSMNTKVFTPSLLKVSHAEL
ERLDRDKDRDTRRKRRQGRFNRRGVGPGTAVTLNDGSLPDLSDVPKTFRIPVPSTILPGG
VDLGPSVNSYRTESSSEYMARPPEPALEQPNPCCRIIDHNPGQYLLVRIKLPSKTDGAIS
QGV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttacaaaccaacccgttcgcgaatatcgggaccacaagctttagcttgtca
caagttcctcagcatatactacaaaacttgacccctgttcagttacaaatgatacaacag
aagcatcaacagttgttgatggagcggcaggctttaatgcagcaacagcagcagcagcaa
cagcaacagcagcagcaacaacaacaacagcaacaacagccgcaacatcatcaaaaccaa
caacatccgtccatgtctcaacgtcatcaaccgggggaattaccgcaacatcagcggcaa
catcaacatcaacaacaacaacaacaacaccatcttcatcaacagcagcaacaacatcag
ctcaagcaacaacagcagcaacagcagttacagcaacagcagttacagcaacagcaacag
caacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacag
cagctacagcagcaacaaatcacagcaaacgccgggcaatcgaccgcactccctcaacaa
ctcaatctcgcccaaagagctcagatattgaaagctaagcagcaacagctggacactaat
cagcaacaagcagcatcgactcctactggtgtcccagcgctcaatctacctccacagatt
gcgcagctccctccacacgtgcagcaacgtgtgcttaacaatttaaaacaacaagccgca
gccaagaacaatcctgcagcagtcgcagctattacagctgcgcaacagcagttggctggc
agaatgtcaaatcatcagtcacctacacccccttccgcccaatttcctcaacagccaata
ccccaaactccagggttaccaaccccgccagtgcctcaggcttctgtgcctcttccaaaa
ttccagactatttttcaggatccacccgaaaggcaaatgagctcgcatagccattggtca
gacaaaattgaaagaggggagctcgatatcaaagaaccagattcaaatcttttgatttac
gaacagaccctgaaacgcgatcgagaaaatggcgaacagctcataaaggagagaactggg
tatgagccttttagcaagtatggttttagccataaagagtatcttacaaggcttttacag
gatttaaattacatcaaggaggtgaaagcagcaagaatgaaatctattactgcgacaaca
caagggctcgtttcaaagagtatatggggggacgggtactctggatatggaaatggcttc
agcaatacagttacgagcgtatccactgggcaaacagggccggatgggcgtcaatcaacg
cactacaacgtgggggaaatataccagcaggcaatgtacgagtcacatgaagaacttgtg
cccgtaagattggagtttgatgctgagcgcgacaacttttcgctgcgagacgtgttcgtc
tggaacaaaaacgagaagataataaagatagaagaacttgtgactgagatgctacgagat
tacaggtttgctcgcaacgaccagtttttcgagacagtggtgcaaagtatcaaggaacaa
ataaatgaatttcagccagatccattccttgaaaacgagggagataggtttggaggggac
gaccttcgtatcaagatccagttagatatagtagttgggcaaaaccagctcatggacgcc
ttcgaatgggatatatcgaatccaagtaacagccccgaggaatttgcagagacgttgagc
caggaacttgaacttccgggcgagttctccacagcgattgctcattccataagggagcag
gttcacatgtatcataagtccttgtcccttacttgttaccagttcgacgggtccacagta
gaagacgaagatatcagaagcagactcctgccacttgttacgctcaacgaagtatttcga
aactccatgaatacgaaggtattcacgcctagccttcttaaggtctcgcatgcggagctt
gagcggttagacagggataaggatagggacactaggcgtaaaaggagacaaggccgcttc
aacagacgtggagttggacctggtaccgcagttacgttaaatgacggctctttacctgac
ctttctgacgtgccgaaaacgttccggatcccggtaccttctactatccttccaggtggg
gttgacttaggtccgtccgtgaattcctacaggaccgaaagttcaagcgagtacatggcg
agaccacccgaaccggccttggaacaaccaaatccatgttgccgaataattgaccacaac
ccaggccaatacttacttgtacgtatcaagcttccatccaaaacagatggggctattagt
caaggtgtataa
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