Lachnoanaerobaculum umeaense: D4A81_01765
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Entry
D4A81_01765 CDS
T05639
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lua
Lachnoanaerobaculum umeaense
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lua03019
]
D4A81_01765
Messenger RNA biogenesis [BR:
lua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D4A81_01765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AYA98765
UniProt:
A0A385PXX5
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All DBs
Position
420610..421557
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AA seq
315 aa
AA seq
DB search
MKFIESLKEGMHISEVYLCKSKMIAISKTGKEYASLSLQDKTGSIDAKIWDLHSPGISDV
DAMSFVVVDAEVTSFNNTLQLKVARIREADAKEYTASDYVPVSKNDIEKMFTELKEKIKS
VKNPFLNKLLTAIFIDDFEFQTTFKASSAAKTVHHGFLGGLLEHTLGVVKLCEYFCANYS
SLNHDLLITSALCHDIGKTRELSAFPANDYTDEGQLVGHIVIGVGILKTQIDKIPGFPKK
LSNELIHCILAHHGELEYGSPKKPALIEALALNLADNADAKMETFIELLAQGQDGATGWL
GYNKLLESNYRKTSV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgaaagcttaaaagaaggaatgcatatttcagaggtttatctgtgtaaa
tctaagatgatagccatatctaagaccggtaaagaatatgccagcctaagtttgcaagat
aagacaggaagcattgatgcaaaaatatgggatttacattctccgggtatatctgatgta
gatgctatgagctttgtggtggtagatgctgaggttacatcatttaataatacattgcag
ctaaaggtggctagaataagagaagctgatgcaaaagaatatacggcatcagactatgtg
cctgtatcaaaaaatgacattgaaaaaatgtttactgaattaaaagaaaagataaaatct
gtaaaaaatcctttcttaaataagcttttgacagctatttttatagatgattttgaattt
caaactacctttaaagcatcttcagcagcaaagacagtgcaccatggatttcttggagga
cttttggaacacactttgggagtggtgaagctttgtgagtatttttgtgcgaattatagt
tcattaaaccatgatttgcttatcacatctgctctttgtcatgacataggaaagacaagg
gagctttccgcatttcctgcaaatgattacactgatgaaggtcagcttgtgggacatata
gtaataggagtggggattttaaagactcagattgacaagattccaggatttccaaagaag
ctttcaaatgagttgatacattgcatattagcacatcatggcgagcttgagtacggttct
ccaaaaaaacctgcacttatagaagctttggcacttaatttggcagataatgcggatgca
aagatggagacatttattgagcttctggctcagggacaggatggtgctacaggctggctt
ggttataataagttacttgagagcaattacagaaaaacaagtgtataa
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