Lachnoanaerobaculum umeaense: D4A81_03550
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Entry
D4A81_03550 CDS
T05639
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
lua
Lachnoanaerobaculum umeaense
Brite
KEGG Orthology (KO) [BR:
lua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lua03021
]
D4A81_03550
Transcription machinery [BR:
lua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D4A81_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AYA99085
UniProt:
A0A385PYT7
LinkDB
All DBs
Position
778887..779459
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AA seq
190 aa
AA seq
DB search
MLNFVAILEEGSKASSTVDDKLIKDIAKGSMEALHTLYEKTHKSVYAFALSITKNTHDAE
DILQDTFLKIYQKAADYTSYDKPMAWIFTIARNFALMKIRDGKKEGSLEDNNDLPEQDFS
FVEDLGERIILRTTINKLDDNERTILLLHAVAGLKNREIADLLDMSINTVLSKYNRTIKK
MQKYLEEEGF
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattttgtggcaatcttagaggagggatcaaaagcttcgtcaacggtggatgat
aaacttataaaagatatcgcaaagggaagtatggaggctttacatactttatatgaaaaa
actcataaaagtgtatatgcctttgccctttcaataacaaaaaatactcatgatgcagag
gatattttgcaggatacttttttgaaaatctatcaaaaagcagcagattacacctcatat
gataaacctatggcatggatttttacaatagcaagaaattttgcactaatgaagattcgt
gacggtaaaaaagagggtagtttagaagataataatgatttgccggaacaggatttttca
tttgtagaagatcttggggaacgtattattcttagaaccactataaataagttggatgat
aatgaaagaacaatactcttgctacacgcagtggcaggtctgaaaaatcgtgaaatagca
gatttacttgatatgtcaataaacacagtgctttcaaagtataatagaacaatcaagaag
atgcagaaatatttggaagaggagggcttttga
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