Lysobacter oculi: DCD74_01655
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Entry
DCD74_01655 CDS
T05527
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lue
Lysobacter oculi
Pathway
lue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DCD74_01655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lue03021
]
DCD74_01655
03400 DNA repair and recombination proteins [BR:
lue03400
]
DCD74_01655
Enzymes [BR:
lue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DCD74_01655
Transcription machinery [BR:
lue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DCD74_01655
DNA repair and recombination proteins [BR:
lue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DCD74_01655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AXA85404
UniProt:
A0A344J8P4
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All DBs
Position
344291..345289
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIEQMTANRARVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVS
IDGVLHEYSTIDGLQEDVLEVLLNLKDVAIRMGTGESATLSLSKQGPGVVTAADIKVDHN
VEILNPTHVIANLTKDVAIDMQLKIERGFGYQPAAARRRPDEEARTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILTDQLSVFGDFTQRERGN
AKQAVSGVDPTLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPTGVSQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaagtactgcgtccgcgtggtccgcagatcgaacagatgacc
gccaaccgtgcgcgcgtcgtgatcgagccgctcgagcgcggctacggccacacgctgggc
aacgcgttgcgccgcgtcctgctgtcgtcgatcccgggcttcgcgatcaccgaagtcagc
atcgacggcgttctgcacgagtacagcaccatcgacggcctgcaggaggacgtgcttgaa
gtcctgctgaacctcaaggacgtcgcgatccgcatgggcaccggcgaaagcgccaccctg
tccctgtccaagcagggcccgggcgtcgtcaccgccgccgacatcaaggtcgaccacaac
gtcgagatcctcaacccgacgcacgtcatcgccaacctgaccaaggacgtggcgatcgac
atgcagctgaagatcgagcgtggcttcggctaccagccggccgccgcgcgtcgtcgcccg
gacgaggaggcccgcaccatcggccgcctgatgctggacgcgtcgttctcgcctgtccgt
cgcgtcgcgtacgcggtggaagccgcgcgcgtcgagcagcgcaccgacctcgacaagctg
gtgctggacatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcaccgaccagctgtcggtcttcggtgacttcacccagcgcgagcgcggcaat
gccaagcaggctgtcagcggcgtcgacccgaccctgctgcgtccgatcgacgacctcgag
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtcgagctgctgaagaccccgaacctcggcaagaagtcgctcacc
gagatcaaggaagtcctcgcccagcgcggtctttcgctcggcatgaagctggaaaactgg
ccgccgaccggtgtctcgcagcacgggatgctgggctaa
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