KEGG   Luteimonas sp. 100111: CNR27_13550Help
Entry
CNR27_13550       CDS       T05077                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lum  Luteimonas sp. 100111
Pathway
lum03030  DNA replication
lum03410  Base excision repair
lum03420  Nucleotide excision repair
lum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lum00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    CNR27_13550
   03410 Base excision repair
    CNR27_13550
   03420 Nucleotide excision repair
    CNR27_13550
   03430 Mismatch repair
    CNR27_13550
Enzymes [BR:lum01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CNR27_13550
    6.5.1.6  DNA ligase (ATP or NAD+)
     CNR27_13550
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CNR27_13550
DNA replication proteins [BR:lum03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CNR27_13550
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CNR27_13550
DNA repair and recombination proteins [BR:lum03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CNR27_13550
   NER (nucleotide excision repair)
    Other NER factors
     CNR27_13550
   MMR (mismatch exicision repair)
    Other MMR factors
     CNR27_13550
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: ATD68324
UniProt: A0A290XGP0
LinkDB All DBs
Position
complement(2985418..2987118)
Genome map
AA seq 566 aa AA seqDB search
MKRFAQLYRELDQSTATLDKRAALIRYFKEAPPRDAAWALYLLSGGKIASARQKIANTRE
LREWIAVESNTPDWLVDDSYDQVGDLAETLALLLDDPVEAAPDIALADWIEQRLLPIANK
HVDMRRGVVVEAWRSLRFDERLLFNKLLTGALRVGVSQRLVQQALAELTGIDIARLAQRM
LGSWSPTPEFLRDLLTVDELPGDRQQPYPFFLASPLESALRVEAGLPEEVPAADETSAPA
AVALANDPGAVARALGPIDDWLLEWKWDGIRLQLLRRDGEVALWSRGEERLDGRFPEIEA
AAATLPDGTVLDGELLAWRADDAMPLPFTALQTRIQRLKPGPKTLADTPVRVQVYDLLEL
AGEDWRDRPQHERRAALEALIAAHGDPRIVVSPRVEAATWADAARLREDARDLGVEGLML
KRAQAPYQAGRRRGDWWKWKIDPLTIDAVLLYAQAGHGRRSTLYTDYTFGLWDGDMLVPV
AKAYSGLDDREILALDKWIRAHTLERFGPVRSVRAHHVFELGFEAVNVSKRHKSGIAVRF
PRILRWRHDKPMAEADRLETLKALAR
NT seq 1701 nt NT seq  +upstreamnt  +downstreamnt
atgaagcgcttcgcccagctctatcgcgaactcgaccagagcaccgccacgctcgacaag
cgcgctgccctgatccgctatttcaaggaggccccgccgcgcgacgctgcatgggccttg
tatctgctgtccggtgggaagatcgccagtgcgcggcagaagatcgccaacacccgggaa
ctgcgcgagtggatcgcagtcgagtcgaataccccggactggctggtggacgacagttac
gaccaggtcggtgacctggctgagaccctggcgctgctgctcgacgatccggtcgaggcg
gcgccggatatcgcgctggccgactggatcgagcagcgcctgctgccgatcgccaacaag
catgtcgacatgcgccgcggcgtggttgtcgaggcctggcgcagcctgcggttcgacgag
cgcctgttgttcaacaagctgttgaccggcgcgttgcgggtcggcgtgtcgcaacggctc
gtgcagcaggcgctggccgagctgaccggtatcgacatcgcgcgcctggcgcaacgcatg
ctcggcagctggtcgccgacgccggaattcctgcgggatctgctcaccgtcgacgaactg
cccggcgatcgccagcagccctatccgttctttctcgcctcgccgctggaatcggcgctg
cgcgtggaggcgggactgcccgaagaggtgccggcggcggatgaaacgtccgcccccgcc
gccgtcgccctcgccaacgatcccggtgccgtcgcccgagcgctcggaccgatcgacgac
tggctgctggagtggaagtgggacggtatccgcctgcagctgctgcgccgcgatggcgaa
gtggccctgtggtcgcgcggcgaggagcggctggatgggcggttcccggagatcgaggcc
gcggccgccacgctgcctgatggcacggtgctcgacggcgagctgctggcctggcgcgcg
gacgacgccatgccgctgccgttcactgcgctgcagacccgcatccagcggctcaagccg
gggccgaagacgctggccgacacgccggtgcgggtgcaggtctacgatctgctggaactg
gccggcgaggactggcgcgatcgaccgcagcacgaacgccgcgccgcattggaggcgttg
atcgccgcgcacggcgacccgcgcatcgtggtctcgccgcgcgtcgaggctgccacctgg
gccgatgccgcgcgcttgcgcgaagacgcccgcgatctgggcgtcgaaggcttgatgctc
aagcgtgcgcaagcgccctaccaggccgggcgaagacggggcgactggtggaaatggaag
atcgatccgctgaccatcgatgcggtactgctctacgcccaggccgggcacggccggcgc
agcacgctctacaccgactacaccttcggcctgtgggatggggacatgctggtgccggtg
gcaaaggcctattcgggcctggacgatcgcgagatcctcgcgctcgacaagtggattcgc
gcgcatacgctcgagcgcttcggcccggtgcgttcggtccgcgcccatcacgtcttcgaa
ctcggattcgaggcggtcaacgtctcgaagcggcacaagtccggcatcgcggtgcgcttc
ccgcggatcctgcgctggcgccacgacaagccgatggccgaagccgaccggctcgagacc
ttgaaggcgctggcgcggtga

DBGET integrated database retrieval system