KEGG   Lipotes vexillifer (Yangtze River dolphin): 103072576
Entry
103072576         CDS       T03090                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lve01009]
    103072576 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lve03036]
    103072576 (KDM5B)
Enzymes [BR:lve01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103072576 (KDM5B)
Protein phosphatases and associated proteins [BR:lve01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103072576 (KDM5B)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103072576 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel zf-C5HC2 PHD zf-PHD-like PHD_4
Other DBs
NCBI-GeneID: 103072576
NCBI-ProteinID: XP_007456219
UniProt: A0A340XAM5
LinkDB
Position
Unknown
AA seq 1352 aa
MGFAPGKAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQS
VQPLETCPPARRAKRMRAEAMNIKIEPEETAEAKTHNLRRRMGCPAPKCENEKDGKSSLK
QEPAERKECITESEKEKPRSRAKKTTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFC
LIPPLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPV
HMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSG
WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKT
WYGVPGYAAEQLETVMKRLAPELFISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEF
VITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMAS
KADVLDVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTT
CFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEW
ALNVNEALEAKINKKKSLVSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLL
NGKRQTRYRSGGGKSHNQLTVNELRQFVSQLHALPCVLSQTPLLKDLLNRVEDFQQHSQK
LLSEEMPSAAELQGLLDVSFEFDVELPQLAEMRVRLEQAHWLEEVQQACLDPSSLTLDDM
RRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKARSLLKARLCLCLPNLTNPVPAYL
PNGAALKDTVQRARDWLQDVEALQAGGRVPVLDTLIELVTRGRSIPVHLNSLPRLESLVA
EVHVWKECAANTFLTENSSYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPSGKKRSPRVES
LSDLERALTESRETASAMATLGEARLREMEALQSLRQANEGKLLSPVQDVEMKVCLCQKA
PAAPMIQCELCRDAFHTGCVAVPSIVQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRV
RLPEGDALRYMIERTVNWQHRARQLLSSGNLQPTQERAGSGLLCGRRQAAAGQAPEASKL
SQPPASMSFLPGAWDGRTSYLHSPFSAGRSCIPLHGLSPEVSELLMEAQLLQVSLPEIQE
LYQTLLAKPSPAQQADRSSPVRPSSEKSDGCRGKRDGVGGLESKLKRRLEREGLSSERWD
RVAKTRTPKKKRIKLSHRKDTDGFKLERARGHELVPSADTQSLPADASCSEHEDSGDEDA
VCPAVSCLQPEGDEVSEVWAAEDVRSLNSETL
NT seq 4059 nt   +upstreamnt  +downstreamnt
atggggtttgctcctggcaaagctgtgggctcccatatcagagggcattatgagcgaatt
ctcaacccctacaacttattcctgtctggagacagtttgaggtgtctgcagaagccaaac
ctgaccacagacacaaaggacaaggaatacaaaccccatgatattccccagaggcagtct
gtgcagcccttggaaacgtgtcccccagctcgacgagcaaaacgcatgagagcggaggcc
atgaatattaaaatagaaccagaagagacagcagaagccaaaactcataacctgagacgt
cgaatgggatgtccagctccaaagtgtgaaaatgagaaagacgggaagagcagcctcaag
caagaacctgctgagaggaaggagtgtattacagagagcgagaaggagaaacccaggagt
cgagcgaaaaaaaccaccagtgctgttgacctgtatgtctgcctcttgtgtggcagtggc
aacgatgaggaccggcttctcttgtgtgatgggtgtgatgacagttaccacaccttctgc
ctgatcccgccactccatgatgttcccaagggagactggaggtgtcctaagtgtttggct
caggagtgcagtaagccacaagaagcatttggctttgaacaggcagccagggactatacc
ctccgtactttcggggaaatggcagatgcgttcaaatctgattacttcaacatgccggtc
catatggttcccacagaactggttgagaaagaattttggcgactggtgagcactattgaa
gaggatgttaccgtggaatatggagccgatatcgcctcgaaggagttcggcagtggcttc
ccggtccgagacgggaaagtgaagctctctcctgaggaggaggaatatcttgacagtggc
tggaatttgaacaacatgccagtgatggagcagtctgtcctcgctcacatcactgctgac
atatgcggcatgaagcttccttggttgtacgtgggaatgtgcttttcttccttctgttgg
catattgaagaccactggagctattccattaactacctgcactggggtgagccaaagacc
tggtatggagtcccagggtacgccgccgagcagctggagaccgtgatgaaaaggctggcc
ccggagctcttcatctcccagcccgacctcctccaccagcttgtcaccatcatgaacccc
aataccctgatgactcacgaagtgcctgtttaccgaactaatcagtgtgctggggagttt
gtgatcacatttccaagagcctaccacagcggtttcaatcaaggttttaatttcgctgag
gccgttaacttctgcactgtcgattggctgcccttaggccgacagtgcgtggagcattac
cgcctgctgcaccgctactgtgtattttcccacgacgagatgatttgcaagatggcctcc
aaggcggacgtactagacgttgtagtggcatcaactgttcagaaagacatggccattatg
attgaggacgagaaggctctaagggaaactgttcgtaaattgggagtaattgattcagaa
agaatggattttgagctgttgccagatgatgagcgtcagtgtgtaaaatgcaaaaccaca
tgcttcatgtctgccatctcctgttcttgtaaacctggcctgcttgtttgcctgcatcat
gtaaaggaattatgttcctgtcctccttataaatataaactgcggtatagatacactctg
gatgatctctaccccatgatgaatgcactgaagcttcgagcagaatcttacaacgaatgg
gccttgaatgtgaacgaagctttggaggcgaagattaataagaagaaaagccttgtcagc
tttaaggctttgatcgaggaatctgagatgaagaaattcccggacaacgatcttttacgt
cacctccggttagtgacacaggacgcggagaaatgtgcctctgtcgcccagcagctgctt
aacggcaagaggcagacgaggtatcgatctggtggagggaaatcccacaatcagttgaca
gtgaatgagctccgacagttcgtgagccagctgcacgccctgccctgtgtcctcagtcag
acgccactgctgaaggacctcttgaatcgtgtagaagatttccaacagcatagccagaaa
ctgctctctgaagagatgcccagtgccgctgagctgcaaggcttgctagacgtcagcttt
gaatttgatgtcgaactgccccagcttgctgagatgcgtgtccggctggagcaggcccat
tggctggaggaggtgcagcaggcttgcctagaccccagctccctcaccttagatgatatg
agacgtctcatagacctgggggtgggtctggcgccatattcagctgtggagaaggctatg
gcacggcttcaagaactgctcacggtatctgagcactgggatgacaaagccaggagtctc
cttaaggccaggctttgcctttgcttaccaaacctcaccaatcctgtccccgcgtacctg
cccaatggtgcggctctgaaagacactgtgcagagagccagagactggcttcaggacgta
gaggccctgcaggctggaggacgtgtgccagtgttagacacactgatagaacttgttaca
cgaggccgatctatcccggtgcatctgaattctttaccgagactggagtcactagtagct
gaggttcatgtttggaaagaatgtgctgctaatacgttcctgactgagaattcgtcctat
tccctcttggaggtgctgtgtcctcgatgtgatattggccttttgggattgaagaggaag
cagagaaagttaaaggagcccttgccaagtggcaagaagagaagccccagagtagagagt
ctgagtgacctggagagagctctgactgaaagcagagagactgcttcagctatggcaacg
cttggggaagcccgcttacgagaaatggaagccttacagtctctcagacaagccaatgag
gggaaattgctgtcgccagtccaggatgtggagatgaaggtctgcctgtgccagaaggcc
ccagccgcccccatgatccagtgtgaactctgcagggatgctttccacaccggctgtgtg
gcagtacccagtattgtgcagggcccccggatctggctgtgtccccattgtcggaggtca
gagaaacctccattagagaaaattctgcccctgctggcctccctccagcgtatccgagtt
cgccttcccgagggagatgcgctgcggtatatgattgaaagaaccgtgaactggcagcac
agagcccgacagctgctctcgtcaggtaacctccagcccacgcaggagcgggcgggctca
ggactgttatgtggcagacggcaggccgcagcaggacaggcgccagaggcaagcaagctg
tctcagcctcctgcctccatgtccttcttgcccggtgcctgggacggcagaacctcatat
ttacactctcccttctctgctggacggagctgtatccccctccatggtctaagcccagaa
gtgagtgagctgttgatggaggcccagctgctccaggtgtcccttcctgaaattcaggag
ctctaccagacgctactcgcaaagcccagccctgcacagcaagctgaccgcagctctcca
gtgagacccagcagtgagaagagtgacggctgccgtgggaagcgagacggagtcggcggc
ctcgagagcaaactgaagagacgcctggaaagagaaggtctctccagtgagcggtgggat
cgagtcgccaaaacgcggacccctaaaaagaagaggatcaaactgagccaccgcaaggac
acggacggtttcaagttagagcgggcgcgcggccatgagctggtcccttctgccgacact
cagtccctgcctgcagacgcgtcctgctcggagcacgaggactctggggacgaggacgcc
gtctgcccggccgtgagctgcctgcagccggagggagacgaggtcagtgaggtttgggcc
gcggaggacgtgcgttcccttaactcagaaaccctgtaa

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