Lipotes vexillifer (Yangtze River dolphin): 103073863
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Entry
103073863 CDS
T03090
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve05016
Huntington disease
lve05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
103073863 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
103073863 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103073863 (HTT)
04131 Membrane trafficking [BR:
lve04131
]
103073863 (HTT)
03029 Mitochondrial biogenesis [BR:
lve03029
]
103073863 (HTT)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103073863 (HTT)
Membrane trafficking [BR:
lve04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103073863 (HTT)
Mitochondrial biogenesis [BR:
lve03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
103073863 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
DUF2357
Motif
Other DBs
NCBI-GeneID:
103073863
NCBI-ProteinID:
XP_007456954
UniProt:
A0A340XCK7
LinkDB
All DBs
Position
Unknown
AA seq
3137 aa
AA seq
DB search
MAYNTRKEIVCRCVGQVSVAAARESPGAGIPEPDVLEGPWRRGEGAPGVHRASAGPSGAK
AAFGKSAPWRSAGVSVVAAVLVGETAGADDWLAPRPANGGGRRLWLKKELSATKKDRVNH
CLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSN
LPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEE
SVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKSSSPTVRRTAAGSAVSICQHSR
RTQYFYSWLLSVLLGLLVPVEEERSALLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTR
KEMEVSPSTEQLVQVYELTLHYTQHQDHNVVTGALELLQQLLRTPPPELLRALTAAGGIR
QLTAAKDEPSCRSRSGSIVELIAGGGSSCSPVLSRKQKGKVLFGEAAALEDDSESRSDGS
SPTFSASVKGEIGGELAASSGVSTPGLAADSVGHDIITEQPRSQHTLQTDSVDLTGCDLT
SGATDGDEEDILSHSSSQMSAIPSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDS
SEIVLDGADSQYPGMQAGQPQDEDEDAAVVLPDEDAEAFRNSSIALQQTHLLKSMGHSRQ
PSDSSIDKFVSRDEAAEPGDPEDKPCRIKGDIGQSSDEDSAPLVHCVRLLSASFLLTGEK
HALVPDRDVRVSVKALALSCVGAAVALHPESFFVRLYRAPLDTMEYPEEQYVSDILNYID
HGDPQVRGATAILCGTLVSSILSRSRFHVGDWMGTVRTLTGNTFSLADCIPLLQKALKDE
SSVTCKLACTAVRLCVMSLCSSSYSEWGLQLLTDMLALRSSSYWLVRTELLETVAEIDFR
LVSFLEAKAENLHRRAHHYTGLLKLQERVLNNIVIYLLGDEDPRVRHVAAASLMRLVPKL
FYKCDQGQADAVVAMARGQSSVHLKLLMHEAQPPSHFSTSTITRVYRGYNLLPSITDVTM
ENNLSRVIAAVSHELITSTTRALTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDES
RKSCTVGMVTMILTLLSSAWFPLDLSAHQDALILAGNLLAASAPRSLRSSWASEEEASPA
ATKQEEVWPALGERTLVPMVEQLFSHLLKVANICAHVLDDVAPGPAIKAALPSLTNPPSL
SPIRRKGKEKEPGEQASVPVSPKKGGEASPASRPSETSGPVAATKSSSLGSFCHLPSYLK
LHDVLKATHANYKVTLDLQSNTEKFGAFLRSALDVLSQILELATLQDIGKCVEEILGYLK
SCFSREPVMATVCVQQLLKTLFGTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYC
FMAPYTHFTQALADASLRNTVQAEQDHDTSGWFDVLQKVSTQLKTNLTSVAKNRADKNAI
HNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQ
FEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHA
IPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKE
SEDKWKRLSRQVADIILPMLARQQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFV
TPDTLASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLLCCPIINRLRDGD
SNSVLEEHSEGRQTKDLPEETFSRFLLQLVGILLEDIVTKQLRVEMSEQQHTFYCQELGT
LLMCLIHIFKSGTFRRITTAASRLLTDGADGSFYGLESLNAWVRSMVPTHPALVLLWCQI
LLLVSHTDYRWWAEVQQTPRRRSLSSTKSLSPRMSGEDEDSDVASKLGTCNREIVRRGAL
ILFCDYVCQNLHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQS
RCENLSTPTTLKRTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLAHMVDTLACRRVEML
LAANLQNSTAQLPAEELSRIQEHLQSSGLAQRHQRLYSLLDRLRLATAPASRGPAPLVTP
HPLDGDGPLALETVSPDKDWYVRLVKSQCWTRSDSALLEGAELVNRIPPGDLSAFMMNSE
FNVSLLAPCLGLGAREICGGQKSPLFAAARTATLDRVTSVVQQLPAVHHVFQPFLPAEPT
AYWSKLDDLFGDAVLYRTLTTLARALAQYLLVFSRLPGHLRLPPEKERDTVNFVVMTLEA
LSWHLIHEQIPLSLDLQAGLDCCCLALQLPGLWGLLSSAEMVTHACSLIHCVRFILEAIV
VQPGDQLLSPERRTNTPQAAREDEVDSNTQNPQYVTAACGMVAEMVEALPLVLALGHKRN
SSAPAFLTPVLKNIVISLARLPLVNSYTRVPPLVWKLGWSPKPGGDFGTVFPEIPVEFLQ
EKEVFKEFIYRINTLGSPGLPSGVVTRHHEDTERTQIHVLAVQAITSLVLSAMTVPVAGN
PAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPIP
SLSPAATGALISHDKLLLQVNPERELGNTSYNLGQVSIRSVWLGSSVTPLREEEWAEEEE
APAPSSPPTSPVSARKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPVILISEVVRSLL
VVSDLFTERSQFETMYLTLTELRRVHPSEDEILQQYLVPATCKAAAVLGMDKAVAEPVSR
LLESTLRSGHLPSRIGALHGVLYVLECDLLDDTAKQLIPVISDYLLSNLKGTAHCVNTHS
QQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIVYHCVLRGLERL
LLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSDPSPAA
PDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQ
QPYPQFMATVVYQVFQTLHSTGQSSTVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSAST
SPWVSAILPHVVSRMGKLEHVDVHLFCLVAADFYRHQIEEELDRRAFQSVFEVVAVPGNP
YHRLLACLRNVHKVTTC
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaacactcgaaaggagatcgtctgtcgatgtgttggacaggtttctgtggcc
gcggcccgtgagtctccgggggctgggatcccggagccagacgtgctggaggggccctgg
aggcggggcgagggggcgcccggtgtgcaccgggcctcggcagggccttctggggccaaa
gcggcctttggcaagtccgcgccctggaggagcgctggggtctccgtggtcgcggcggtc
ctagtaggcgagacggcgggcgcagatgactggctggcgccgcgcccggccaatggcgga
ggtcgccgcctctggctaaagaaagaactctcagccaccaagaaggaccgtgtgaatcat
tgtctgacaatatgtgaaaacatagtggcacagtctctcagaaattctccagaatttcag
aaacttctgggcatcgctatggaactttttctgctgtgcagtgatgacgcagagtcagat
gtcaggatggtggctgacgagtgcctcaacaaagtcataaaagctttgatggattctaat
cttccgaggttacagttagaactctataaggaaattaaaaagaacggcgctcctcggagc
ctgcgcgctgccctgtggaggtttgccgagctggctcacctcgttcggcctcagaaatgc
aggccttacttggtaaaccttttgccttgcctgacgcgcacaagcaagagacccgaggag
tctgtccaggagaccttggctgcagctgtccctaagattatggcttcttttggcaatttt
gcaaacgacaatgaaattaaggttctgttaaaggctttcatagcgaatctgaagtccagc
tctcctaccgtgcggcggacagcagccggctcggcggtgagcatctgccagcactccagg
aggacacagtacttttacagctggctgctcagtgtgctcttaggtttgctggttcccgtg
gaggaggaacgctccgcccttctgattctcggagtgctgctcacactgaggtatttggtg
cccttgctgcagcagcaggtcaaggacacgagcctgaaaggcagctttggggtgacacgg
aaagagatggaggtctccccctcgacggagcagcttgtccaggtgtacgaattgaccttg
cattatactcagcaccaagaccacaatgttgtgactggggcactggaactcctgcagcag
ctcctcagaacccctccacctgagctcctgcgagcgctgaccgcagcgggcggcatcagg
cagctcactgccgctaaggatgagcccagttgccgaagtcgtagcggaagtatcgtggag
cttatagctggagggggttcttcatgcagccctgtcctttcaagaaaacaaaaagggaaa
gtgctctttggagaagcagcagccttggaggatgactctgagtcaaggtcagatggcagc
agccccaccttttcagcctcagtcaagggtgagattggtggtgagctggctgcctcttct
ggggtctccactcctggcttagctgccgactctgtgggtcacgacatcatcactgagcag
ccccgctcacagcacacacttcagacggactcggtggatctgaccggctgtgacttgacg
agcggtgccactgatggggacgaggaggacatcttgagccacagctccagccaaatgagc
gccatcccgtctgaccctgccatggacctgaacgatgggacccaggcctcctctcccatc
agtgacagctcccagaccaccaccgaggggcccgattcagccgtgaccccttccgacagt
tctgaaattgtattagatggtgccgacagccagtacccagggatgcaggcggggcagccc
caggacgaggacgaggatgctgctgtggttcttcctgatgaagacgcggaggctttcaga
aactcttccatcgcccttcaacaaacacatttgttgaaaagcatgggccacagcaggcag
ccctctgacagcagtatagataaatttgtctcaagagatgaagctgctgagccaggagat
ccagaagacaagccctgccggatcaaaggcgacattggccagtccagtgatgaagattct
gctcctcttgtccattgtgtccgccttctgtccgcttcatttttgctaactggggaaaaa
cacgccttggttccggatagggatgtgagggtcagcgtgaaggcactggcgctcagctgt
gttggagctgctgtggcccttcaccctgaatctttcttcgtcagactttacagagcaccg
cttgacactatggaataccctgaggagcagtacgtgtcagacatcttgaactacatcgac
catggggacccacaggtcagaggagccacagctatcctctgtgggacccttgtctcctcc
atcctcagcaggtcccgcttccacgtgggagactggatgggcaccgtcagaactctgaca
ggaaatacattttctctggcggactgcatccccctgctgcagaaagctttgaaggacgag
tcttctgttacttgcaagttggcttgtacagctgtgaggctctgcgtcatgagtctctgc
agcagcagctacagcgagtgggggctgcagctcctcaccgacatgctggccctgcggagc
agctcctactggctggtgaggacggagcttctggagaccgtggcagagatcgacttcagg
ttggtgagctttttggaggcaaaagcagaaaacctacacagaagggcccatcattataca
gggcttttaaaactgcaagaacgagtgctcaataacattgtcatctatttgcttggggat
gaagaccccagggtgcgccatgttgctgcagcttcgttaatgaggcttgttccgaagctg
ttttataagtgcgaccaaggacaggctgacgcagtcgtggccatggcgagaggtcaaagc
agcgttcacctgaagcttctcatgcacgaggcgcagcctccatctcacttctccaccagc
accataaccagagtatatagaggctataacctactaccaagcataacagacgtcactatg
gaaaataacctttcgagagtcattgcagcagtttctcatgagctaatcacatcaaccacg
agggcgctcacatttggatgctgtgaagctctgtgtcttctgtcaactgcctttccagtt
tgcatttggagtttaggttggcactgtggagtgcccccactgagcgcctctgatgagtct
agaaagagctgtactgtgggcatggtcacgatgatcctgaccctgctttcatcagcctgg
ttcccactggatctctcagcccatcaagatgctttgattttagccgggaacttgcttgca
gccagtgcccccagatctctgaggagctcgtgggcctccgaagaagaggccagccctgca
gccaccaagcaggaggaggtgtggccggctctgggcgagcggaccctggtgcccatggtg
gagcagcttttctctcacctgctgaaggtggccaacatctgtgcgcacgtcctggacgat
gtggctcctggaccagcaataaaggcagccttgccatctctaacaaacccgccttctctg
agtccaatccgacggaagggaaaagagaaggaacccggagagcaggcgtctgtacccgtg
agtcccaagaaaggcggtgaggccagtccagcctctcgaccgtctgaaacctcagggcct
gttgcagcaaccaagtcctcgtcattggggagtttctgtcaccttccttcttaccttaaa
ttgcacgatgtcctgaaagctacacacgcaaactacaaggtcaccttggatcttcagagc
aacaccgaaaagtttggggcttttctgcgctctgccttggatgttctctctcagattcta
gagttggcaacactgcaggacatcgggaagtgtgtcgaagagatcctggggtacctgaaa
tcctgcttcagtcgagaaccagtgatggcaactgtttgtgtccagcagctgttgaagact
ctctttgggacaaacttggcctcccagtttgatggcttatcttccaaccccagcaagtct
caagggcgtgctcagcgccttggttcctccagcgtgaggccgggcttgtaccattactgc
ttcatggctccgtacacccacttcacccaggccttagccgacgccagcctgaggaacacg
gtgcaggcagagcaggaccacgacacttcagggtggtttgacgtactccagaaagtgtct
acccaattgaagacaaacctcaccagcgtcgcaaagaaccgcgcggacaagaatgctatt
cataatcacattcgtttgtttgagcctcttgttataaaagctttaaaacagtacacgaca
accacctctgtgcagttacagaagcaggttttggatttgctggcacagctggttcagtta
cgggttaactactgccttctggattcggatcaggtgttcatcggatttgtgctgaagcag
tttgaatacattgaagtgggccagttcagggaatcagaggcaattattccaaacatcttt
ttcttcctggtattactgtcttatgaacgctatcattcaaaacagatcattggaattcct
aaaatcatccagctctgtgacggcatcatggccagtgggaggaaagctgtgacacacgcc
ataccagccctgcagcctatagtccacgacctcttcgttttaagaggaaccaataaagct
gatgcaggaaaagagcttgaaacccagaaagaggtggtggtgtcaatgttactgagactc
atccagtaccatcaggtgttggagatgttcatcctggtcctgcagcagtgccacaaggag
agcgaggacaagtggaagcggctctctcggcaggtagccgacatcatcctcccgatgttg
gccaggcaacagatgcacattgattctcacgaagcacttggagtgttaaatacgttattt
gagattttggccccttcctccctccgtcctgtggacatgcttttacggagtatgttcgtc
accccagataccctggcatctgtgagcactgttcaactatggatatccggaatcctagcc
attctgagggttctgatttcccagtcaactgaagacattgttctttctcgcattcaggag
ctttccttctctccatatttactctgctgtccgataattaataggttaagagatggggac
agtaattcagtactggaagaacacagtgaagggagacaaacgaaggatttgccagaagaa
acattttccaggtttctgctacaactggttggcatccttttagaggacattgttacaaag
cagctaagagtggaaatgagtgaacagcagcatactttctactgccaagaactaggcacg
ctgctcatgtgtctgatccacatcttcaagtctgggacattccggagaatcaccacagct
gcctcgagactcttgacggacggcgcggacggcagcttctatggcctggagagcttgaac
gcgtgggtgcgctccatggtccccacccacccggccctcgtgctgctctggtgtcagatc
ctgctgctcgtcagccacaccgactaccgctggtgggcagaggtgcagcagaccccccga
agacgcagtctgtccagcacgaagtcacttagtccccggatgtctggagaggacgaggat
tctgatgtggcttccaaactgggaacgtgcaatagagaaatagtacgaagaggagctctc
attctcttctgcgattatgtctgccagaacctgcacgattcagagcacttaacgtggctc
atcgtcaaccacattcaggacctgatcagcctgtcccacgagcctcctgtgcaggacttc
attagtgctgtccatcggaattccgcggccagcggccttttcatccaggcaattcagtct
cgttgtgaaaatctttcaactcccaccacgctgaagagaaccctccagtgcctggaaggg
atccacctgagccagtcgggcgccgtgctgacgctgtacgtggacaagcttttgtgtact
ccattccgtgtgctggctcacatggtcgacacccttgcttgtcgccgggtggagatgctc
ctggctgcaaatttacagaacagcacggcccagctgccggcggaagagctaagcaggatc
caggagcacctgcagagcagcgggttagcgcagagacaccaaaggctctactccctgctg
gacaggcttcgtctcgccaccgcaccggcatcgcgtggccccgctcctctggtcacgccc
cacccgctggacggggacgggcccctggcactggagacagtgagtcctgacaaagactgg
tacgtacgtctggttaaatcccagtgctggacacggtcagactctgcactgctggaaggg
gcggagctggtgaatcggatccctccgggtgacttgagcgcgttcatgatgaactcggag
ttcaacgtgagcctgctagccccgtgcttgggcctgggcgcgcgtgagatctgcgggggc
cagaagagccccctttttgcagcagctcgcacggcaactctggaccgcgtgaccagtgtg
gttcagcagctgcccgctgttcaccacgttttccagccgttcctgcctgcagagcccacc
gcctactggagcaagttggatgatctctttggggatgccgtgctgtatcggaccctgacc
actctggcccgggccctggcccagtacctgttggtgttctccaggctgcccggccacttg
cgccttcctcccgagaaggagagggacaccgtgaactttgtggtcatgaccctcgaggcc
ctgtcgtggcatttgatccacgagcagatcccactgagtctggacctgcaggcgggcctg
gactgctgctgcctggctctgcagctgcccggcctctggggcctgctctcctctgctgag
atggtgacccacgcctgctccctcatccactgcgtgcggttcatcctggaagccattgtg
gtgcagcctggggaccagcttcttagtccagaaagaaggacgaacaccccacaggccgcc
agagaggacgaagtggattcaaacacacagaaccctcagtatgtcactgcagcctgtggg
atggtggccgagatggtggaggcactgccgttggtgctggccttgggtcataaaaggaac
agcagcgccccggcgttcctcacgccggtgctcaagaacatcgtcatcagcctggcccgc
ttgcccctcgtcaacagctacacgcgcgtcccgcccctggtgtggaaactcggatggtca
cccaaaccaggaggggattttggcaccgtgttccccgagatccccgtggagttcctccag
gaaaaggaagtcttcaaagagttcatctaccgcatcaatacgctaggtagtccgggtctc
ccctccggcgtggttacacgtcatcacgaagacacggagaggacccagatccacgtcctg
gccgtgcaggccatcacctccctggtgctgagcgcgatgactgtgcctgtggccggcaac
ccagccgtgagctgcttggagcagcagccccggaacaagcccctgaaagctctcgacacc
aggtttgggaggaagttgagcatcatcagaggaatcgtagagcaggaaattcaagcgatg
gtttcaaagagggagaatatcgccacccatcatctgtaccaggcgtgggaccccatccct
tctctgtctccagctgctaccggtgccctcatcagccacgacaagctcctgctgcaggtc
aaccccgagcgggagctggggaacacgagctacaacctcggccaggtatccatccgctcc
gtgtggctggggagcagcgtcacgcccctgagagaggaggagtgggccgaggaggaggag
gcccccgcgccgtcgtccccacccacgtctccagtcagcgccaggaaacaccgggctgga
gtcgacatccattcctgttcgcagtttttgctcgagttgtacagtcgctggatcctgccg
tcaagttcagccaggaggacccccgtcatcctgatcagcgaggtggtgcggtcgctcctc
gtggtctcagacttgtttacggagcgcagccagtttgagacgatgtacctgacgctgaca
gagctgcggagggtgcacccttcggaggacgagattctccaacagtacctggtacccgcc
acctgcaaggcggccgccgtcctcgggatggacaaggccgtggcagagccggtcagccgg
ctgctggagagcacgctcaggagcggccatctgcccagcaggatcggagccctgcatggc
gtcctctacgtgctggagtgtgacctcctggacgacaccgcaaagcagctcatcccggtc
atcagcgactatctcctctccaacctcaaaggcacagcccactgcgtgaacacccacagc
cagcagcacgtgctggtgatgtgtgccacggccttctacctgattgagaactacccgctg
gacgtcgggccagagttctcggcatccataatacagatgtgtggggtgatgctgtctgga
agcgaggagtccaccccatccatcgtttaccactgtgtcctgaggggcctggagcgcctc
ctgctctccgagcagctctcccggctggatgcggagtccctggtcaagctgagcgtggac
agagtgaacgtgcacagcccacaccgcgccatggcggccctgggcctgatgctcacctgt
atgtacacaggaaaggagaaaatcagtccaggcagaacctcagaccccagccctgccgcc
cctgacagcgagtcagtgattgtggccatggagcgtgtgtctgttctctttgacaggatc
aggaaggggtttccctgtgaagccagagtggtggcgcggatcctcccccagtttctagat
gacttcttcccgccccaggacgtcatgaacaaggtcattggagagtttctgtccaatcag
caaccgtacccacagttcatggccaccgtagtgtaccaggtgttccagactctgcacagc
acggggcagtcgtccacggtccgggactgggtcatgctgtccctctccaacttcacgcag
aggacgccggttgccatggccatgtggagcctctcctgcttctttgtcagcgcttccacc
agcccgtgggtttcagcaatccttccgcacgtcgtgagcaggatgggcaagctggagcac
gtggacgtgcacctcttctgcctggtggccgcggacttctacaggcaccagatagaggag
gagctcgaccgcagggccttccagtctgtgttcgaggtggtcgcagtgccaggaaacccg
tatcaccgcctgctggcttgtttgcggaatgtccacaaggtcaccacgtgctga
DBGET
integrated database retrieval system
