KEGG   Lipotes vexillifer (Yangtze River dolphin): 103074668Help
Entry
103074668         CDS       T03090                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve05034  Alcoholism
lve05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:lve00001]
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    103074668 (HDAC6)
  09165 Substance dependence
   05034 Alcoholism
    103074668 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lve01009]
    103074668 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lve03019]
    103074668 (HDAC6)
   04131 Membrane trafficking [BR:lve04131]
    103074668 (HDAC6)
   03036 Chromosome and associated proteins [BR:lve03036]
    103074668 (HDAC6)
Enzymes [BR:lve01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103074668 (HDAC6)
Protein phosphatases and associated proteins [BR:lve01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103074668 (HDAC6)
Messenger RNA biogenesis [BR:lve03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     103074668 (HDAC6)
Membrane trafficking [BR:lve04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    103074668 (HDAC6)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103074668 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 103074668
NCBI-ProteinID: XP_007450942
UniProt: A0A340WTN2
LinkDB All DBs
Position
Un
AA seq 1142 aa AA seqDB search
MTSTGQDSTTTRQRRSRHNPHPPAHDSSVTSKRGVKKGAVLRSSPSLAEVKKKGRMKKLS
QAAEQDLVVGLQGLDLNREARTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEHLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLRAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLTASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVSLEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPVLEFPGAPCPSA
QASISCALEALEPFWEVFVRSAETLEEEDTVEGDDVEKEAEGPWQPPELPILTWPVLQAR
TGLVYDPQMMDHYNLWDNHHPETPQRIKRIMHHLEELGLAGRCLALPARPATDAELLACH
SAEHVDRLRATEKMKTRELHREGANYDSIYICPSTFTCAQLAAGAACRLVEAVLAGEVLN
GIAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAVSGRVLRILIVDWDVHHGNGTQHIF
EEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGPRLGDADYLVAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGSCQVSPEGYAHLTHLLMGLANGRIILILEG
GYNLTSISESMAACTHSLLGDPPPLLTLLRPPLSGALASITETIQVHRRYWCSLRVTKVK
DKEGPSSSKLITKKAPQAANPLSAKGMTMPEGNILEAGTGKTTSATSVKESTPGQTTSET
AVMEFTQDQSSETAMGGAAALNQATSEAATGDVTLDQTTSEEAVGGAELIQSPPASCTDN
QTPPASPVQGATIQISPSKLTGNLRTLELDKAQEPPEEEELLGEAAGGQDMNESVLMHVT
GDHADTDQAMFYAVTPLPWCPHLVAVCPVPEAGLDVTQPCKDCGALQENWVCLSCYQVYC
SRYINAHMLQHHEGSGHPLVLSYADLSTWCYHCQAYVHHKALLAVKNIAHQNKFGENMLH
SH
NT seq 3429 nt NT seq  +upstreamnt  +downstreamnt
atgacctccaccggccaggattccaccacaaccagacagcgaaggagtaggcacaatccc
catcctcccgcccacgactccagcgtcacctcgaagcgaggtgttaaaaagggtgccgta
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagt
caagcagccgagcaagacctagtcgtggggctgcaagggctggatctgaaccgggaggcc
aggacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgctatcaaggaacatctgatc
caggagggcctcctggatcgctgtgtgtcctttcaggcccgatttgccgaaaaggaggag
ctgatgttggttcacagtctagaatacattgatctgatggagacgacccagtacatgaat
gagggggaactccgtgtcctagcagatacctatgactcagtttatctgcatccgaactca
tacacctgcgcctgcctggcctcaggctccgtcctcaggctggtggatgcagtcctgagg
gctgagatccggaatggcatggcgataatcaggcctcctggacaccacgcccagcacagt
ctcatggacgggtattgcatgttcaaccacgtggctgtggctgcccgctatgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgtgcaccatggtcaaggaaca
cagttcacctttgaccaagaccccagtgtcctctatttctccatccaccgctacgagcag
ggtcggttctggccccaccttacagcctccaactggtccaccacaggttttggccaaggc
cagggatacaccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacatc
gccgctttcctgcacgtcctgctgccagtttcccttgagttccagccccagctggtcctg
gtagctgctggatttgatgccctccaaggggaccccaagggcgagatggccgccactccg
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctc
tcactggagggtggctacaacctccgctccctggctgagggcgtcagcgcctcgctccac
acccttctgggagacccttgccccgtgctggagttccctggcgccccttgcccgagtgcc
caggcatcgatctcctgtgctctggaagcccttgagcccttctgggaggtcttcgtgaga
tcagctgagaccctggaggaggaggacactgtggagggggacgatgtggagaaggaggcg
gagggaccgtggcagccccctgagctcccaatcctgacgtggccggtgctgcaggctcgc
acagggctggtctatgacccacagatgatggatcactacaacttgtgggacaaccaccac
cccgagacgcctcagcgcatcaagcgcatcatgcaccacctggaggagctgggtcttgcc
gggcgctgtctcgccctgcccgcacgtccagccacggacgctgagctgctcgcctgccac
agtgctgagcacgtggatcgtctgcgggccacagagaagatgaagacccgggagctgcac
cgcgagggcgccaactatgactccatctacatctgccccagcaccttcacctgtgcgcag
ctggctgctggcgccgcctgccgcctggtggaggctgtgctggcgggagaggttttgaat
ggcattgctgtggtgcgtccccccggccaccatgcagagcgggatgccgcttgcggtttc
tgcttcttcaactctgtggctgtggctgctcgccatgcccaggccgtcagtgggcgtgtg
ctgcggatcctgatcgtggactgggacgtccatcatggtaatggaactcagcacatattt
gaggaggaccccagcgtgctgtacatttctctgcaccgctatgaccatggcaccttcttt
cctatgggggacgagggcgccagcagccagataggtcaggctgcaggcacgggcttcact
gtcaacgtggcctggaatgggccccgcttgggtgacgccgactacctggttgcctggcat
cgtctggtgcttcccattgcctatgagtttaacccggagctggtgctggtctcagctggc
ttcgatgctgcccggggggacccactgggcagctgccaggtgtcgcctgagggctatgcc
cacctcacccacctgctgatgggcttggccaatggccgcattatccttatcctagagggt
ggttataacctgacatccatctcagagtccatggccgcctgcacccactccctccttggg
gatccgccacccctgctgaccctgctgcggcccccactgtcaggggccctggcctcgatc
actgagaccatccaagtccatcgcagatactggtgtagtttgcgggtcacaaaggtcaaa
gataaagagggaccctccagttctaagttgatcaccaagaaggcaccccaggcagccaat
cctttgtcagccaaggggatgaccatgccagaagggaacattctggaggcaggcacaggg
aagaccacctcagcaacatctgtgaaagagtccactccaggccagactacgtcagagaca
gctgtgatggagttcactcaggaccagtcatcagagacagccatgggaggagctgctgcg
ctgaaccaggccacctcagaggcagccacaggggatgtcacgctggaccagaccacctcg
gaggaggctgtggggggagctgagctgatccaaagccctccagcctcatgcactgacaat
cagactcctccagcgtcacccgtgcaaggagccacaatccagatatcccccagtaagctg
actggaaatctcaggaccttggaactagacaaggcacaggaacccccagaagaggaggag
ctactaggagaggcagctggaggtcaggacatgaatgagtcagtactgatgcatgtcact
ggagaccatgctgacactgaccaagccatgttttatgctgtaacaccactgccctggtgt
ccccatttggtggcagtatgccctgtacctgaagcaggcctggatgtgacccaaccttgt
aaggactgtggagcactccaggagaactgggtgtgtctgtcttgctaccaggtctactgc
agtcgttacatcaatgcccatatgctccaacaccatgaaggctcgggacacccgctggta
cttagctacgccgacctgtctacctggtgttaccactgtcaggcctacgttcaccacaag
gctctcctagctgtgaagaacatcgcccaccagaacaagtttggggaaaacatgctccac
tcacactaa

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