Lipotes vexillifer (Yangtze River dolphin): 103074741
Help
Entry
103074741 CDS
T03090
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103074741 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103074741 (POLR1A)
Enzymes [BR:
lve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103074741 (POLR1A)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103074741 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
103074741
NCBI-ProteinID:
XP_007466806
UniProt:
A0A340XZJ1
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFEKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERIQYRFLEENADPTAFEIQEELERYTTKILQNNLLGSHGAR
VKNVCESRSKLIAFFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHRKADQKDT
EPQGIEEAQMGKRGYLTPTSAQEHLTALWNNEGFFLNYLFLGLEDVGMESRFNPNMFFLD
FVVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPAA
DEEKDPSIAMDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPSVHPGASMVINEDGSRTALSASNLTQREAVAKQLLTPAMGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMELVYRG
LTDRVGRVKLFPPAILKPCPLWTGKQVVSTLLINIIPEDHVPLNLSGKAKVGGKAWVKES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHRIIEESTHCGPRAVRAALNLPEVASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPSAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNCEVIMKSKHLHEVLSRADPQKALRHFKAIKRWQSKHS
NTLLRKGAFLNYSQKIQAAVKALNLEGVNQNGRSPETHQMLRMWAELDEQSRRKYQKKAS
PCPDPSLSVWRPDIYFASVSETFEKKVDDYSREWAAQAERSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKRALKKVKGLKKQLTRVCLGEVLEKIDVQESFSMGEKQNKFRVYQLRFQ
FLPHAYYQQEKCLRPEDILHFMETRFFKILMESIRKKNSKASAFRSVNTRRATQRDLDNE
GESERSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEDEEDGEDLQE
EGTVLGEGTPQAQAQEEEGGSGPEEDSLPAAPLAQPWKPTRSREPQDAEAVERRVRAVRE
CHPFIEDYQYDTQGGLWCQVMVKLPLIKVNFDMSSLVVSLAQGAVVYATKGITRCLLNET
TNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEKEIKD
VFAVYGIAIDPRHLSLVADYMCFEGXXXXXXXFGIRSNSSPLQQMTFETSFQFLKQATMM
GSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagagcttaagaaattaagcgttaagtccattacaaaccctcggtacctagat
agcctggggaacccgtcggtgaacggcctgtacgatctagctctgggccccgcagactcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgctccgggcacctgggccac
atcgagctcccgctcactgtgtacaaccctctcctcttcgagaaactctacctgctgctc
cggggttcctgtttaaactgtcacatgctgacttgcccccgggctgtgattcacctgctg
ctctgccagctgagagttctggaagtcggggccctacaagcagtgtacgagctggagaga
attcagtacaggtttctggaagaaaatgctgatcctactgccttcgaaattcaggaagag
ttagaacgatatacaaccaaaatcctacagaacaacctcctgggatcccacggcgcacgt
gtaaaaaatgtctgtgagagcagaagcaaacttattgctttcttctggaaggcacatatg
actgctaagcgatgtccccactgcaaaactgggcggtcagttgtccgaaaggagcacaac
agcaagctgacagtcacgtatccggccatggtgcacaggaaggctgaccagaaggacact
gagccccagggaattgaggaagctcagatgggaaaacgaggatacttgacacccaccagc
gctcaagaacatctcacggctctttggaataatgaaggattctttctgaattaccttttt
ctgggactggaagatgtgggcatggagtccagattcaatcccaatatgttctttctggat
ttcgtggtggtgccaccctcaaggtatcgccctgtcagccgcctcggggaccagatgttc
accaacggccagacggtgaacctgcaggctgtcatgaaggatgtggttctgatccgaaag
cttctggccttgatggcccaagaacaggagctgccaagtgaggtggcagcacccgccgca
gatgaggaaaaagacccttcgatcgctatggaccggtcctttctgagcctacttccaggc
cagtccctcacagacaaactttacaacatttggattcgccttcagagccacgtcaatatt
gtgtttgatagtgagatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatgggttattccggaagcacatgatgggaaagcgagtagactatgca
gcccgctcagtcatctgcccggacatgtacatcaacaccaatgaaatcggaattcccatg
gtgtttgccacaaagctgacctaccctcagccagtcaccccctggaacgttcaggaactg
aggcaggcggtcatcaacggccccagtgtgcacccaggagcctccatggtcatcaacgag
gatggtagccgcacggccctgagcgcctcgaacctaacccagcgggaggccgtggccaaa
cagctcctgacaccagccatgggggcacctaagccccaggggacaaaaattgtatgccgg
cacgtgaagaatggggacattctcctcctgaaccgacagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcatcctgcccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgactttgatggagacgagatgaacgcccacttccctcag
agtgaactgggccgggctgaggcctacgtcctggcctgcacggatcagcagtaccttgtt
cccaaggatggccagccattggcagggctgatccaagatcacatggtttcgggtgcgaac
atgaccattcgaggctgctttttcagccgggagcagtatatggagctggtgtaccgagga
ctcacagacagagtggggcgtgtgaagctctttcctcctgccatcctgaagccctgtccg
ctgtggacaggaaagcaggttgtgtccacgctgctcatcaacataatcccggaggatcac
gtcccactgaacttgtcaggaaaggcgaaggttggcgggaaggcctgggtgaaggagtct
cctcggcccgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggggtgctggacaaggcgcattacgggagctccgcctacggc
ctggtccactgctgctacgagatctacggcggggagaccagcggcaaggtcctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcactttgggcgtggaa
gacattttggtcaagccgaaggccgatgtccggagacacaggatcattgaagagtccacc
cactgtgggccccgggctgtcagggctgcgttaaaccttccagaagtggcatcgtgtgat
gaggtccgaggcaagtggcaggatgcccatctaggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaatcattacagcaatgaaattaacaaggcatgc
atgcctttcggcctgcacaggcagttcccagagaacaacttacagatgatggtgcagtct
ggagccaaaggttcaactgtgaataccatgcagatctcgtgcctgctgggccagatcgaa
ctggaaggtcggagacccccgctgatggcatctggcaagtcactgccctgcttcgagcca
tatgagttcacccccagtgctggcggcttcgtcactggcagattcctcaccggcatcaag
cctcctgagttctttttccactgcatggccgggcgagagggtctggtggacacggctgtg
aagaccagccgctccggctacctccaaaggtgcatcatcaagcacctggaggggctggtc
gtccagtatgacctgacagtccgcgacagcgacggcagcgtggtgcagttcctgtatggg
gaggacggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctc
gccagcaactgtgaggtgataatgaaatcgaagcacctccatgaagttttatccagagca
gatccccagaaagctctccgccacttcaaagccatcaaaagatggcaaagcaagcattcc
aacaccctgctgagaaaaggcgccttcttgaattattcccagaaaattcaagcagctgtg
aaagccttgaacctcgagggcgtaaaccagaacggccgcagccccgagactcaccagatg
ttgaggatgtgggctgagttagatgagcaaagccggaggaaataccagaagaaggcgtct
ccttgtcctgaccccagtctgtctgtctggcgcccagacatctactttgcatcagtgtca
gaaacatttgaaaagaaggtggatgactacagtcgcgagtgggcagctcaagcagagagg
agttacgagaaatcggagctctctctggacaggttgaggactcttctgcagctgaagtgg
cagcgctcgctgtgtgacccgggagaggccgtgggcctgctggccgcacagagcatcggg
gagccctccacacagatgaccctgaacaccttccactttgccggcagaggcgagatgaat
gtcaccctgggcattcccaggttgagggagattctcatggtggccagcgccaacatcaag
acgcccatgatgagcgtgcctgtgttcaacaccaagagagcgctgaagaaagtgaaaggc
ctgaaaaagcagctcaccagggtgtgcctcggggaggtgttggagaaaattgatgtccag
gagtccttctctatgggggagaaacagaacaagttccgggtgtaccagctgcggtttcag
ttcctgccacacgcctactaccagcaggaaaagtgcctgagacccgaggacatcctgcat
tttatggaaacaagattctttaaaattctgatggaatccatcagaaagaagaatagtaaa
gcatcagctttcagaagcgtaaacacgcggagagctacccagcgggatctagacaacgaa
ggcgagtcggagaggagtcggggagagcaggaaggcgacgaggaagaggaggggcacatc
gtggacgccgaagctgaggagggagacgctgatgcctcggacgccaaacgcaaagagaaa
caagaggaggaggtcgactacgagagtgaggatgaggaggacggcgaggacctgcaggag
gaagggaccgtcctcggggaaggcactccccaggcccaggcacaggaggaggaggggggc
tcaggccccgaggaggactcactccccgccgcccccctggcgcagccgtggaagcccacc
cgcagccgggagccccaggacgccgaggcggtggagcgccgggtgcgggccgtgcgcgag
tgccacccgttcatagaggactaccagtacgacacccagggcggcctgtggtgccaggtg
atggtgaaactccctctcatcaaggtcaactttgacatgagctccctggtagtgtccctg
gcccaaggcgccgtcgtctatgcaaccaagggcatcacgaggtgcctcctgaacgaaacc
accaacagtaagaatgagaaggagctcgtcttaaacacagaaggcatcaacctcccggag
ctgttcaagtacgccgaggttctggatttgcgccgcctctattccaatgacatccatgcc
atggccagcacgtacggcatcgaggccgcactgcgggtgatcgagaaggagatcaaggat
gtgttcgccgtgtacggcatcgccatcgacccccgccatctctccctggtcgctgactac
atgtgctttgagggnnnnnnnnnnnnnnnnnnnnnctttgggatccggtcgaactcctcc
ccactgcagcagatgacgtttgagaccagcttccagtttctgaagcaggccaccatgatg
ggatcccacgatgagctgaggtccccgtcagcctgtctcgtggttgggaaggtcgtcaag
ggcgggacaggcctcttcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system
