KEGG   Lipotes vexillifer (Yangtze River dolphin): 103076461Help
Entry
103076461         CDS       T03090                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve00310  Lysine degradation
lve04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:lve00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    103076461 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    103076461 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lve03036]
    103076461 (SETDB1)
Enzymes [BR:lve01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     103076461 (SETDB1)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     103076461 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103076461 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537 Chromo
Motif
Other DBs
NCBI-GeneID: 103076461
NCBI-ProteinID: XP_007460299
LinkDB All DBs
Position
Un
AA seq 1288 aa AA seqDB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRYLVSFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASTLEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPPAPPGPPLSPQAGDSDLESQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGISQTHRSPLGSTTSAPAP
PAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRGKNPLLV
PLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDP
YVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTG
PEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINSNSGYQYKRLEECLPTGVYECN
KRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFA
DKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESN
DDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMPSKDSRPPDVGPPRVPVPPS
IPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGHAGGGRGEAE
KASTSGLGFKDEGDIKQPKKEDPDDRNKMSVVTESSRNYGYNPSPVKTEGLRRPPSKTSM
HQSRRLMASAQSNPDDILTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSEG
DDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYD
GEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagcagtggttgaggagctgggtatctctatggaggaactt
cggcagttcattgatgaagaactggaaaagatggactgtatacagcagcgcaagaagcaa
ctagcagagttggagacatgggtaatacagaaggaatccgaggtagcccatgttgaccag
ctgtttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttttac
tccaaactgggactacagtaccgggacagtagttctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcaaatgtctggagaattgagtaaagatggtgacctggtagtt
agcatgcgcattctgggcaagaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggccaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctacgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtacctggtttcttttgatgatggc
tacgcttcctatgttacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgccccatggttttgctcaagagtggacagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctggagcccatgttcagc
atgaagacatcctcagcctctacactagagaagaagcaaggaggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggtcctgtggtccagtacactcaggatctgacc
agtactggaacccagttcaagccagtggagccccctcagcctacagctccacctgcccca
cctgccccacctggtccacctctgtccccccaggcaggtgacagtgacttggaaagccag
cttgcccaatctcggaagcaggtagccaaaaaaagcacatccttccggccaggatctgtg
ggctctggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtgggaaa
cctgggatcagtcaaacacatagatcacctttaggatccacaacctctgccccagcaccc
ccagctcccccagcacctccagccttccatggcatgctggagcgggccccggcagagccc
tcctaccgcgcccccatggagaagcttttctacttacctcatgtctgcagctatacttgt
ctgtctcgagtcagacctatgagaaatgagcagtatcggggcaagaaccctctcctagtc
ccactactgtatgacttccggcggatgacagcccggcgccgagttaaccgcaagatgggc
tttcatgttatctataagacaccctgtggcctctgccttcggacaatgcaagagattgag
cgctacctttttgagacaggctgtgacttcctcttcctggagatgttctgtttggatcca
tatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggacatc
acctatgggaaggaagatgttcctctgtcctgtgtcaatgagattgacacaactccccca
cctcaggtggcctacagcaaggaacgaatcccgggcaagggtgttttcattaacacaggc
cctgaatttctggttggctgtgactgtaaagatgggtgccgggacaagtccaagtgtgcc
tgccatcagctaactatccaggctacagcctgcaccccaggcggccaaatcaactctaac
tctggctaccagtacaagagactagaagagtgtctgcccacaggagtttatgagtgtaac
aaacgctgcaattgtgacccaaacatgtgcacaaaccggttggtgcagcatggactgcag
gttcgactgcagctcttcaagacccagaacaagggctggggtatccgctgcttggatgac
attgccaaaggctcctttgtctgtatttatgcaggcaaaatcctgactgatgactttgct
gacaaggagggcctggaaatgggtgatgagtattttgccaatctggaccatatcgagagc
gtggagaacttcaaggaaggatatgagagtgatgccccctgttcctctgacagcagtggt
gtagacttgaaggaccaggaagatggcaacagcggtacagaggaccccgaagagtccaat
gacgatagctcagatgataacttctgtaaggatgaggacttcagcaccagctcggtgtgg
cgcagctatgctacccggcggcagacccggggccagaaggagaatggattgtctgagatg
ccttccaaggactctcgccccccagacgttgggcccccacgtgttcctgtccctccatcg
atccctgtaggtggctgcaatccaccttcctctgaagagacacccaagaacaaagtggcc
tcgtggttgagctgcaatagtgtcagtgaaggtggctttgctgactctgatagccgttca
tccttcaaaactagtgaaggtggggaaggtcacgctgggggaggcagaggggaggctgag
aaggcttccacctcagggctgggcttcaaggatgagggtgacatcaagcagcccaagaaa
gaggaccctgatgaccggaacaagatgtcagtagttactgaaagctctagaaattatggt
tacaatccttctcccgtgaagactgaaggacttcgccgcccaccaagtaagactagcatg
catcagagccgacgactcatggcctctgctcagtcaaaccctgatgacatcctgacactg
tccagcagcacagaaagtgagggggaaagtgggaccagccgaaagcccactgctggccag
acttcagccacagccgttgacagtgatgatatccagaccatctcctctggctctgaaggg
gatgactttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagtaaaa
tcaacccggggttttgctcttaaatcaacccatgggattgccattaaatcaaccaacatg
gcatccgtggaaaagggagagagtgcacctgttcgtaagaacacacgccaattctacgat
ggggaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctc
aatcacagctgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgatctt
cgcttcccgtgggtggccttctttgccagcaaaatccgggctgggacagaactcacctgg
gactacaactacgaggtgggcagcgtggagggcaaggagctgctttgctgctgtggggcc
atcgaatgcagagggcgtcttctttag

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