KEGG   Lipotes vexillifer (Yangtze River dolphin): 103079661Help
Entry
103079661         CDS       T03090                                 

Gene name
HDAC4
Definition
(RefSeq) histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04371  Apelin signaling pathway
lve05034  Alcoholism
lve05165  Human papillomavirus infection
lve05169  Epstein-Barr virus infection
lve05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:lve00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    103079661 (HDAC4)
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    103079661 (HDAC4)
  09165 Substance dependence
   05034 Alcoholism
    103079661 (HDAC4)
  09172 Infectious diseases: Viral
   05169 Epstein-Barr virus infection
    103079661 (HDAC4)
   05165 Human papillomavirus infection
    103079661 (HDAC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lve03036]
    103079661 (HDAC4)
Enzymes [BR:lve01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103079661 (HDAC4)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103079661 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln Oxidored_nitro
Motif
Other DBs
NCBI-GeneID: 103079661
NCBI-ProteinID: XP_007470003
UniProt: A0A340YAA6
LinkDB All DBs
Position
Un
AA seq 1148 aa AA seqDB search
MLLSLIYASARPSGMAAAXLGRVLRDTGGLAWASLGLRASEXGRHLPRKAVSSSLELSVA
ISRDRGRLLGTIDGLSGRDQPVELLNPARVNHMPGSVDVASALPLPVAPPAVPMDLRLDH
QFPLPATEPGIREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQ
QELLAVKHQQELLEHQRKLERHRQEQELVKQQREQKLQQLKHKEKGKESAVASTEVKMKL
QEFVLNKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGASVSYSHPVLGMYDA
KDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSA
PGSAPSSPNNSSGNASAENGIAPAVPSIPTETSLAHRLVTREGSVGPLPLYTSPSLPNIT
LGLPATGPSAGAASQQDAERLALPALQQRISLFPGTHLTPYLGTAPLERDSGATPSSLLQ
HVVLLEQPPAQTPLVTDRYLAGLGALPLHAQPLVGAERVSPSVHKLRQHRPLGRTQSAPL
PQSAQALQHLVVQQQHQQFLEKHKQHLQQPQLHLSKIIPKASEPARQPESHPEETEEELR
EHQALLEEPFLDRPSGPKEAHALAGVQVKQEPVESDEDDVAPGQRQPTEQELLFRQQALL
LEQQRVHQLRSYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGL
VYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHS
EAHTLLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVG
CVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVTRTLV
VDWDVHHGNGTQQAFYSDPGVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTG
GLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYL
TKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRS
MEKVIGIHSQYWRSLQRLASTTSYSLVEAQKCENEEAETVTAMASLSVGVKAPEKRPDEE
PMEEEPPL
NT seq 3447 nt NT seq  +upstreamnt  +downstreamnt
atgcttctgagcctcatttatgcatcagctcgcccaagtgggatggctgctgctnngctg
ggccgtgtgctcagggacactggcgggctggcgtgggcgtccttggggctccgcgcatca
gagnccgggagacatttgcccaggaaggccgttagttcatcgctggagttaagcgtggcg
atctccagagacaggggcaggctgctaggaaccattgatggactttctggccgagaccag
ccggtggagctgctcaaccctgcccgcgtgaaccacatgcccggctcggtggatgtggcc
tcggcgctgcctttgccagtggcccccccggcggtgcccatggacctgcgcctggaccac
cagtttccgctgcccgcgacagagcccggcatccgggagcagcagctgcagcaggagctc
ctggccctcaagcagaagcagcagctccagaggcagatcctcatcgccgagttccagagg
cagcacgagcagctgtcccggcagcatgaagcccagctccacgagcacatcaaacaacag
caggagctgctggccgtgaagcaccagcaggagctgctcgagcatcagcggaagctggag
agacaccgccaagaacaggagctggtgaagcagcagcgggagcagaagctgcagcagctc
aagcacaaggagaaaggcaaagagagtgctgtggccagcacagaagtgaagatgaagcta
caggagtttgtcctcaataaaaagaaggcgctggcccaccggaacctgaaccactgcatg
tccagtgaccctcgctactggtatgggaagacgcagcacagctccctggaccagagctcc
ccgccccagagcggggcgtcggtctcctacagccacccggtcctgggcatgtacgacgcc
aaagatgactttcctctcagaaagacagcatctgaacccaatctgaaattacgctccagg
ctaaagcagaaagtggctgaaagacggagcagccccctgttacgcaggaaagatgggcca
gtggtcacggctctaaaaaagcgtcctttggatgtcacagactcggcctgcagcagcgcc
ccgggctccgcacccagctcacccaacaacagctctgggaatgccagcgcggagaatggg
atcgcgcccgctgtccccagcatcccgaccgagaccagcctggcacacagactcgtgacg
cgagaaggctcggtgggcccgctgcccctgtacacgtcaccatccctgcccaacatcacg
ctgggacttcccgccaccggcccctccgcgggggcggccagccagcaggatgccgagaga
ctggccctcccggccctccagcaacgcatctccctcttccccggcacccacctcaccccc
tacctgggcaccgcacccctggagcgcgactcgggggcgactcccagctcccttctgcag
cacgtggtcctcctggagcagccgcccgcgcagacgcccctcgtcacagaccgctatctt
gcaggcctgggagcgctgcccctgcacgcgcagcccctggtgggggcggagcgcgtgtcc
ccgtccgtgcacaagctgcgacagcaccgcccgctgggccgcacgcagtcggcgccgctg
ccccagagcgcgcaggcgctgcagcacctggtggtccagcagcagcaccagcagttcctg
gagaagcacaagcagcacttgcagcagccgcagctgcacctcagcaagatcatccccaaa
gcgagcgagccggcccggcagcccgagagccatcccgaggagaccgaggaggagctgcgc
gagcaccaggccctcctggaggagcccttcctggaccggccctcggggccgaaggaggcg
cacgcgctggccggggtgcaggtgaagcaggagcccgttgagagcgatgaggacgacgtg
gcgccgggccagcggcagcccaccgagcaggagctgctgttcagacagcaagccctcctc
ctggagcagcaacgggtccaccagctgaggagctaccaggcgtcgatggaggcggccggc
atccccgtgtcctttggcagccaccggcctctgtcccgggcgcagtcctcccccgcgtcc
gccaccttccccatgtctgtgcaggagcccccgaccaagccgcggttcaccacaggcctc
gtgtatgacacgctgatgctgaagcaccagtgcacctgtgggaacaccaacagccacccg
gagcacgccgggcgcatccagagcatctggtcccggctgcaggagaccggccttcgaggc
aaatgtgagtgcatccgcggacgcaaggccaccctggaggagctgcagacggtgcactcg
gaggcgcataccctgctctacggcacaaaccccctcaacaggcagaaactggacagtaag
aaacttctaggctcgctaacgtcggtgtttgtcaggctgccctgcggtggtgtcggggta
gacagtgacaccatatggaacgaggtccactcgtcgggggcagcccgcctggccgtgggc
tgcgtggtggagctggtcttcaaggtggccacaggggaactgaagaatggctttgccgtg
gtccgccccccgggacaccacgcagaggagagcacgcccatgggcttctgttacttcaat
tccgtggctgtcgcagccaagcttctccagcagaggttgagtgtgaccaggaccctcgtg
gtggactgggacgtgcaccacgggaacgggacccagcaggccttctacagtgaccccggc
gtgctgtacgtctcgctgcaccgctacgacgacgggaatttcttcccgggcagcggggca
cccgacgaggtgggcacggggcccggcgtgggcttcaacgtcaacatggctttcaccggc
ggcctcgacccccccatgggagacgcagagtacttggcggccttcagaactgtggtcatg
ccgatcgccaacgagtttgccccagacgtggtgctggtgtcatcgggcttcgacgccgtg
gagggccaccccacgcccctcggaggctataacctctccgccaaatgtttcgggtacctg
acgaagcagctgatgggcttggctggcggccggatcgttctggcgctggaggggggccat
gacctcacagccatttgcgacgcctcggaagcctgcgtctctgctttgctgggaaacgag
cttgatcctctcccagaaaaggttttacagcagagacccaacgcgaacgctgtccggtcg
atggagaaggtcattgggatccacagccagtactggcgctccctgcagaggctcgcctcc
accaccagctactctctggttgaggcccagaagtgcgagaacgaagaggccgagaccgtc
actgccatggcctcgctgtccgtgggcgtgaaggcccctgagaagaggcccgacgaggag
cccatggaagaggagccgcccctgtag

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