Lipotes vexillifer (Yangtze River dolphin): 103084137
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Entry
103084137 CDS
T03090
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
103084137 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103084137 (SLIT1)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103084137 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
hEGF
LRRCT
LRR_1
LRR_9
EGF_2
EGF_3
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
103084137
NCBI-ProteinID:
XP_007456259
UniProt:
A0A340XAR7
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MALTPWRGPSAGLVRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAVPKNIP
RNTERLELNGNKITRIHKNDFAGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ
LYALPELLFQNNQALSRLDLSENSIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNSITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAGHVPSCTLSSGSCPAMCTCSNGIVDCRGKGL
TAIPANLPDTMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINCIRPNAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYLIPGTEDYQLNSECNSDVVCPHKCRCEASMVECSGLKLTKIPERIPQ
ATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRSVRLLSLYDNQIATISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAVPDFRCE
EGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNATELYLDGNQFTLVPRQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDVSTLQEGIFTDVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECLGPPSLAVQAKCNPCLSSPCQNRGTCHNDPLGAYRCACPSGYKGRD
CEVSLDSCSSSPCGNGGTCHSQEGEDAGFTCSCPSGFEGPTCGVNTDNCVGHSCANGGTC
VDGIGSSPCQCPLQYSGTACEQLVDFCSSDLNPCQHEAQCVGTPDGPRCECAPGYVGDNC
TENRDDCKDHRCQNGAQCVDGVNGYSCLCAEGYSGQNCETPPRPPAPRSPCEGTECQNGA
NCVDQGSQPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDRDHIAVELYQGHVRVSCDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWEGLHCDQPADGP
CHGHKCVHGKCMPLDALSYSCQCQDGYSGALCNQAGAPADPCGGLRCLHGHCQASATKGA
HCVCDPGFSGELCEQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECLGSCPGQGCCQG
LRLKRRKFTFECSDGTSFAEEVEKPTKCGCAFCA
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgccctggagggggccctcggcggggcttgtccggcccgagctctggctg
ctgctgtgggcagccgcgtggcgcctgggcgccacggcgtgccccgccctctgcacctgc
accggcaccacggtggactgccacggcacggggctgcaggccgtccccaagaacattcca
cggaacacggagcgcctggaactcaacggcaacaaaatcactcggatccataagaatgac
tttgcgggactcaagcagctgcgggtgctgcagctgatggagaaccagattggagtggtg
gaacgcggggctttcgacgacatgaaggaactggagcggctacgactcaaccggaaccag
ctgtacgcgttaccagaactgctgttccagaataaccaggctctgtcgaggctggacctg
agtgagaacagcatccaggccatccccagaaaggcttttcgtggagccacagacctcaaa
aatttacagctggacaagaaccagatcagctgcattgaggaaggagctttccgggctctg
cgggggctggaagtgctgactctgaacaataacagcatcaccaccatccccgtgtccagc
ttcaaccacatgcccaagctgcggaccttccgcctgcactccaaccacctgttctgcgac
tgccacctggcctggctctcccagtggctgaggcagcggccaaccatcgggctcttcacc
cagtgctcgggccctgccagcctgcgcggcctcaacgtggccgaggtccagaagagtgag
ttcagctgctcaggccagggggaggcggggcacgtgccttcctgcaccctctcctccggc
tcctgcccagccatgtgcacctgtagcaacggcattgtggattgtcgtggcaaaggcctc
accgccatccccgccaacctgcctgacaccatgacggagatccgcctggagctcaatggg
atcaagtccatcccccccggagccttctctccctacagaaagcttcggaggatagacttg
agcaacaaccagatctcggagattgcacccgatgccttccagggcctccggtccctgaac
tcgctggtcctctatgggaacaagatcacagacctcccccggggagtgtttggaggcctg
ttcaccctacagctcctgctcctgaatgccaacaagatcaactgcatccggcccaacgcc
ttccaggacctgcagaacctctcactgctctccctgtatgacaacaagatccagagtctc
gccaagggcaccttcacctccctgcgggccatccagaccttgcatctggcccagaaccct
ttcatctgtgactgtaacctcaagtggctggcagacttcctgcgcaccaaccccatcgag
accagcggggcccgatgcgccagcccccggcgccttgccaacaagcgcatcgggcagatc
aagagcaagaagttccggtgctcagccaaagagcagtaccttattccaggaacagaggat
taccagctgaacagcgaatgcaacagcgacgtggtctgtccccacaagtgccgctgcgag
gccagcatggtggagtgctccggcctcaagctcaccaagatccctgagcgcatcccccag
gccacggccgagctacgattaaacaacaatgagatttccatcctggaggccaccgggatg
tttaaaaaactcacccatctgaagaaaatcaatctgagcaacaacaaggtgtcggagatt
gaagacggggccttcgagggcgcagcctcagtgagcgagctgcacctgaccgccaaccag
ctggagtccatccggagcggcatgttccggggcctggacggcctgaggacgctgatgctg
aggaacaaccgcatcagctgcatccacaatgacagcttcacgggtctgcgcagtgtccgc
ctcctctcgctctacgacaaccagatcgccaccatctcccctggggccttcgacaccctc
caggccctctccacgctaaaccttctggccaaccctttcaactgcaactgccagctggct
tggctgggcgactggctgcgcaagaggaagatcgtgacggggaacccgcgatgccagaac
ccggatttcttgcggcagattcccctgcaggacgtggctgtccccgacttcaggtgtgag
gaaggccaggaggaggggggctgcctgccccgcccgcagtgcccccaggagtgcgcctgc
ctggacaccgtggtccgatgcagcaacaagcacctgcaggccttgcccaagggcatcccc
aagaatgccacagagctctacttggatgggaatcagttcacgctggttccgagacagctg
tccaccttcaagtacctgcagcttgtggacctgagtaacaacaagatcagttccttaagc
aactcctctttcaccaacatgagccagctgaccactctgatcctcagctacaatgccctg
cagtgcatccctcctttggccttccaggggctccgctccctgcgcctgctgtccctgcat
ggtaacgacgtctccaccctccaagagggcatcttcacagatgtgacctccctttctcac
ctggccattggtgccaaccccctgtactgtgactgccacctgcgctggttgtccagctgg
gtgaagacaggctacaaggaacctggcattgcccgctgtgccgggcccccagatatggag
ggcaagctgctcctcaccacgcctgccaagaagtttgaatgcctaggtccgcccagcctg
gctgtccaggccaagtgcaatccctgcttgtccagcccatgccagaaccggggcacctgc
cataacgacccccttggggcgtacaggtgtgcctgccccagcggctataagggccgagac
tgcgaggtgtccctggacagctgttccagcagcccctgtggaaatggcgggacctgccac
tcgcaggagggcgaggatgccggcttcacgtgctcctgcccctccggctttgaaggaccg
acgtgtggggtaaacacggacaactgtgtgggacactcatgtgccaacgggggcacctgt
gtggacggcattggcagctccccctgccagtgccccctgcagtactcgggaacggcctgt
gagcagctggtggacttctgctcctcggatttgaacccgtgtcagcacgaggcccagtgt
gtgggcaccccagatgggcccaggtgtgagtgtgcacctggttatgtgggtgacaactgc
acggagaaccgggatgactgcaaggaccaccgctgccagaatggggcccagtgtgtggat
ggagtcaacggctactcctgcctctgtgctgagggttacagtgggcagaactgcgagacc
cctccccgcccgcctgctcccaggagcccctgtgaggggactgagtgccagaacggggcc
aactgtgtggaccagggcagccagcccgtgtgccagtgcctcccgggctttggcggcccc
gagtgtgagaagttgctcagtgtcaacttcgtggatcgggacacttacctacagttcacc
gacctgcagaactggccacgggccaacatcacactgcaggtctccacagcagaggacaat
gggatcctgctgtacaatggggacagagaccacatcgcggtggagctctaccagggccat
gtgcgtgtcagctgtgacccgggcagctaccccagctctgccatctacagtgccgagacg
atcaatgatgggcagttccacaccgttgagctggtcacctttgaccagatggtgaatctc
tccatcgatggcggcagccccatgaccatggacaacttcggcaaacactatacactaaac
agcgaggcgcccctctatgtgggagggatgccagtggacgtgaattcggctgccttccgc
ctgtggcagatcctcaatggcacgagcttccacggttgcatccgaaacctgtacatcaac
aacgagttgcaggacttcaccaagacgaggatgaagccaggggtggtgccaggctgtgag
ccctgccggaagctctactgcctgcatggcatctgccagcccaatgccacaccagggcct
gtgtgccactgcgaggccggctgggagggcctgcactgcgaccagccagccgacggcccc
tgccatggccacaagtgtgtccacgggaagtgcatgcctctagatgctctttcctacagc
tgccagtgccaggatgggtactcgggggccctgtgcaaccaggctggggcacctgcagac
ccctgtgggggcctgcggtgcctgcacggccactgccaggcctcagccaccaagggggca
cactgtgtgtgtgaccccggcttttcgggcgagctgtgcgagcaagagtccgagtgccgg
ggggaccctgtccgggactttcaccaggtccagaggggctatgcaatctgccagaccacg
cgcccgctgtcgtgggtggagtgcctgggctcatgccccggccagggctgctgccagggc
ctgcggctgaagcggaggaagttcacctttgagtgcagcgacgggacctcttttgccgag
gaggtggagaagcccaccaagtgtggctgtgccttctgcgcttag
DBGET
integrated database retrieval system