Leifsonia xyli subsp. xyli CTCB07: Lxx02130
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Entry
Lxx02130 CDS
T00190
Symbol
pimB
Name
(GenBank) ABC transporter, NBP/MSD fusion protein (pimaricin)
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lxx02130 (pimB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lxx02000
]
Lxx02130 (pimB)
Transporters [BR:
lxx02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Lxx02130 (pimB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
ABC_membrane_2
RsgA_GTPase
AAA_23
ACR_tran
AAA_22
AAA
AAA_30
Bestrophin
ABC_ATPase
TsaE
nSTAND3
AAA_29
AAA_21
NB-ARC
AAA_33
DO-GTPase2
DUF87
MMR_HSR1
NACHT
cobW
ATP_bind_1
NTPase_1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AAT88268
UniProt:
Q6AH77
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All DBs
Position
complement(210003..211859)
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AA seq
618 aa
AA seq
DB search
MFGGTPAKKAEHFWPSFNRLIGLLRTERLAMVWVTLLVVVSVALTVIAPKILGNATDVIV
NGVTGARQANGQPAPGPGVDFTDLGRLLMIVLAMYIAASLLQWWQGYILNALVMRVVYRL
RAEIEDKLNRLPLSYFDTRQRGDLMSRVTNDVDNIQTALQQAFSQLIQSVLMVIGIGVMM
FIVSWQLALIALISIPLSGIIAGVIGTRSQKLFKQQWNSTGALNGHIEESYSGLDLVRAF
GRDEVMLERFDERNGKLWSSMVGAQFVSGMIMPAMNFVSYLSYVLIAVVGALRVTAGQLS
IGDVTAFIQYSREFSQPIGQIAGMANMLQSGVASAERTFEFLDSDEQTPEHETEHLPERA
NGRVELDSVDFSYDPETELIRDLSLSVEPGHTVAIVGPTGAGKTTLVNLIMRFYELNGGA
IRLDGIDTTDLSRSELRGQVGMVLQDAWLFSGTIRENIRYGRLEASDEEVVAAAKATMVD
RFVRQLPDGYDTVIEADGGNVSAGERQLLTIARAFIANPSLLILDEATSSVDTRTELLVQ
HAMAALRSDRTSFVIAHRLSTIRDAHTILVMEKGRIVEQGDHKTLLAKKGAYYDLYMTQF
RGAAEESGQEEPEGVAAR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcggcacaccggcgaagaaggcggagcacttctggccgtcgttcaaccggctg
atcgggttgctgcgcacggaacggctcgcgatggtctgggtcaccctgctcgtggtggtc
tcggtcgcgctcaccgtgatcgcgccgaagatcctcgggaacgccaccgatgtgatcgtc
aacggcgtcaccggcgctcggcaggcgaacggccagcccgctcccggtcccggggtcgac
ttcacggatctcggccggctgctgatgatcgtgctcgccatgtacatcgccgcgtcgctg
ctgcaatggtggcagggctacattctgaacgcgctcgtgatgcgagtggtctaccgcttg
cgcgccgagatcgaggacaaactcaaccgtctgccgctcagctacttcgacacccgtcag
cgcggtgatctgatgtcgcgcgtcacgaacgatgtcgacaacatccagaccgctctgcag
caggccttctcacagctgatccagtcggttctgatggtcatcgggatcggcgtcatgatg
ttcatcgtgtcgtggcagctcgcgctcatcgcgcttatcagcatcccgctctccggcatc
atcgccggggtgatcggcacgcgctcacagaagctgttcaaacagcagtggaactccacc
ggcgccctcaacgggcacatcgaggagtcctactccgggctcgacctggtgcgcgccttc
ggccgcgatgaggtcatgctggaacggttcgacgagcgcaacggcaagctctggtcgtcg
atggtcggtgcgcagttcgtctccggcatgatcatgccggcgatgaacttcgtctcctac
ctctcctacgtgctgatcgccgtcgtcggtgcgctgcgggtgaccgcaggccagctgagc
attggcgatgtgacggcgttcatccagtactcgcgcgagttctcccagcccatcggccag
atcgcgggcatggcgaacatgttgcagtccggcgtcgcgtcggcggagcgcaccttcgag
ttcctcgactcggacgagcagacgcccgaacacgagaccgagcacctccccgagcgggcg
aacggccgcgtcgagctggacagcgtcgacttctcctacgatcccgagaccgagctcatc
cgcgatctctcgctctccgtcgagcccggccacacggtcgcgatcgtcggcccgaccgga
gccggaaagacgacgctggtcaacctcatcatgcggttctacgagctgaacggcggtgcc
atccgcctcgatggcatcgacaccaccgacctctcgcgctccgagttgcgcggtcaggtc
gggatggtgctgcaggatgcgtggctcttctccgggaccattcgtgagaacatccgctat
ggccgcctcgaagcatccgacgaggaggtggtcgctgccgcgaaggcgacgatggtcgac
cgtttcgtccgccagctgccggacggctacgacacggtcatcgaggcggacggcggcaac
gtctccgcgggcgagcgccagttgctcaccatcgcccgggctttcatcgccaacccgtcg
ctgctcatcctggacgaagccacgtcctcggtggacacccgcaccgagttgctggtgcag
cacgcgatggcggcgttgcgcagcgaccggacttcgttcgtgatcgcccaccgcctgtcc
accatccgggacgcgcacaccatcctcgtgatggagaagggccggatcgtggagcagggc
gatcacaagaccctcctcgcgaagaagggcgcctactacgacctgtacatgacgcagttc
cgcggcgcggctgaggaatcgggccaggaagagcccgagggcgtcgccgcgagatga
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