Leifsonia xyli subsp. xyli CTCB07: Lxx03430
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Entry
Lxx03430 CDS
T00190
Symbol
dnaZ
Name
(GenBank) DNA polymerase III, gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03030
DNA replication
lxx03430
Mismatch repair
lxx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lxx03430 (dnaZ)
03430 Mismatch repair
Lxx03430 (dnaZ)
03440 Homologous recombination
Lxx03430 (dnaZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxx03032
]
Lxx03430 (dnaZ)
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx03430 (dnaZ)
Enzymes [BR:
lxx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lxx03430 (dnaZ)
DNA replication proteins [BR:
lxx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lxx03430 (dnaZ)
DNA repair and recombination proteins [BR:
lxx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lxx03430 (dnaZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
Rad17
AAA_14
DnaX_C
AAA_30
nSTAND3
AAA_28
Mg_chelatase
T2SSE
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AAT88359
UniProt:
Q6AGY6
LinkDB
All DBs
Position
338721..341090
Genome browser
AA seq
789 aa
AA seq
DB search
MWVVTALYRRYRPDTFAEMIGQSQVTDPLTTALRTNRVNHAYLFSGPRGCGKTTSARILA
RCLNCAEGPTDIPCGVCPSCVELSRGGGGSLDVVEIDAASHNGVDDARDIRERAIFAPAR
DRYKIFILDEAHMVTPQGFNALLKIIEEPPDHVKFIFATTEPEKVIGTIRSRTHHYPFRL
VPPALMLEYVQTLCDSEGITVAPGVLPLVVRAGGGSPRDTLSLLDQLMAGSEGSSIEYER
AVALLGYTHAALLDEVVDAIAARDAAGAFAAVDRVIQTGQDPRRFVDDLLERLRDLIVVA
ATSVEGAAAVLRGVPADVLDTMGRQAMMFGAAELSRCADIVNAALTEMTGATSPRLHLEL
MVARVLVPSSDDTERGALARVERLERRVGVSDAAGGGPARGAALTAAAARSAPAPEPPAI
RAAEPAPRAEPPARAEKAAPESDAVAEPQPESAPSIGPVTTQQVKDSWPQILDAVQRAKR
SAWMVVFTAQVRALSDDVLTLSFPSDNDVQSFRQPPAPGTQGVSEYLRQAIVDILGIRVK
FIARADGGSGSPGPGEPAASAAETWPGADGPGGAPHGGGGMAAGVPDRLAFEGPASGSPV
SGRSAPGASPSATAPPGTSGSGVAATAAAEASGAAGAASRSAAAPSSRPVTEWATVAIPV
AEPVGAASPVVTLERPGPAAVPAASRADSPTRGGTPLSDDVPPEETEPPFEPDVPEEPGE
GGAGAPPPPLGSAPAPSTVPAPRTVRAPSTGVRPPAFQAPQRYGEAVVREILGATFLEEQ
PAPATPGMR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
gtgtgggtggtcaccgctctctatcgccgctaccggccagacaccttcgccgagatgatc
ggccagtcgcaggtgaccgatccgctcacgacggcgttgcgcaccaaccgggtgaaccac
gcctacctgttctccggtccgcgcggctgcggcaagaccacgtccgcgcgcatcctggcc
cgctgcctcaactgcgcggagggccccaccgacatcccgtgcggcgtctgccccagctgc
gtcgagctcagccgcggcggcggcggttcgctcgacgtggtcgagatcgacgccgcgagt
cacaacggtgtggacgacgcccgcgacatccgcgagcgcgcgatcttcgccccggcccgc
gaccgctacaagatcttcatcctggacgaggcccatatggtcacgccccagggcttcaac
gcgctgctgaagatcattgaggagccgccggatcatgtcaagttcatcttcgcgaccacg
gagccggagaaggtcatcggcactatccgctcccggacgcaccactacccgttccggctc
gtcccgcccgcgctgatgctcgagtacgtccagaccctgtgcgacagcgaggggatcacc
gtcgcgcccggcgtgctcccgcttgttgttcgcgccggcggcggctcaccgcgcgacacg
ctctcgctgctcgaccagctgatggcgggatccgagggcagttccatcgaatacgagcgg
gccgtcgccctcctcggctacacgcacgcggccctgctcgacgaagtcgtggatgcgatc
gctgcccgggatgcggctggggccttcgcggccgtcgaccgcgtgatccagaccggacag
gacccgcgccgcttcgtggacgacctactcgaacgcctccgcgacctgatcgtcgtcgcg
gcgaccagcgtcgagggcgctgccgctgtcctccgcggcgtccccgccgacgtgctggac
acgatgggcaggcaggcgatgatgttcggcgcggccgagctcagccgctgcgccgacatc
gtcaacgccgcgctgaccgagatgaccggcgcgacctcgccacgcctgcacctggagctc
atggtcgcccgcgtgctcgtgccgtcgagcgatgacaccgagcgtggtgcgctggcccgg
gtcgagcggctggagcgccgggtgggagtgagcgacgccgcgggcggcggaccggcgagg
ggggcggcactcacggcggcggcggcccgcagcgcgcccgcgccggagcccccagcgatt
cgcgcggcggagcctgctcccagagcggagccgcctgcgagggcggagaaagccgcaccg
gagtcggatgcggtggcggaaccacagccggagtccgccccgtccatcggcccggtgacg
acgcagcaggtcaaggactcctggccgcagattctggatgccgtccagcgcgccaagcgc
agcgcttggatggtcgtcttcaccgcacaggtgcgtgccctcagcgatgatgtgctcacg
ctgtccttcccgagcgacaatgacgtccagagtttccggcagcccccggcgccgggcacc
cagggcgtcagcgagtacctccgccaggccatcgtcgacatcctgggaatccgggtgaag
ttcatcgcccgcgctgacggcggttccggctcgccgggcccgggtgagccagcggcgtct
gcggccgagacctggcccggggcggacggccccggcggtgcgccgcacgggggcggggga
atggcggccggcgttcccgatcggctcgccttcgaggggccggcctcgggatcgccggtt
tcgggacggtcggcgcccggtgcatcgccgtcggcgacggctccccccgggacctccggc
tccggtgtcgcagcgaccgctgccgcggaggcgtcgggagccgccggggcggcatcgcgc
tcggccgccgcgccgtcctccaggccggtgacggagtgggcgaccgtcgccatccccgtc
gcggaaccggtgggggcggcgtccccggtcgtgaccctcgaacggcccgggcccgccgct
gttccggccgcatcccgggccgacagcccgacccgcggtggcacgcctctatccgacgat
gtgccgccggaggagaccgagccgccgttcgagccggacgtcccggaggagcccggcgaa
ggcggggcgggtgccccccctcctcctcttggctcggctccggctccgtccaccgttccg
gccccgcgcaccgtccgcgcaccgtccaccggcgtccggccccccgccttccaggccccg
cagcgctatggcgaggccgtcgtccgcgagatcctgggggcgaccttcctcgaggagcag
cctgctccagccaccccggggatgaggtag
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