Leifsonia xyli subsp. cynodontis DSM 46306: O159_08770
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Entry
O159_08770 CDS
T02852
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lxy
Leifsonia xyli subsp. cynodontis DSM 46306
Pathway
lxy03420
Nucleotide excision repair
lxy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O159_08770
03430 Mismatch repair
O159_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxy03400
]
O159_08770
Enzymes [BR:
lxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O159_08770
DNA repair and recombination proteins [BR:
lxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O159_08770
MMR (mismatch excision repair)
Other MMR factors
O159_08770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
Motif
Other DBs
NCBI-GeneID:
17047926
NCBI-ProteinID:
AGW41021
UniProt:
U3P5H5
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Position
826003..829332
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AA seq
1109 aa
AA seq
DB search
MNAGDDILGDLLGVETEQSGLDLVESGFALSEPESGPVRPCRRVSAVEIADALGLPRPTG
QQRAVIEAPLSPAIVVAGAGSGKTETMANRVVWLLANGEVRVPEVLGLTFTRKAAGELAE
RVRKRIEQLVASGLTDIQFDPFEAPDVATYNAFANAIFRENALLIGREPEAAVLSEASAW
QLARRVVVDSADDRLVDLDRNVDAVTAAVLDLSRALSENIAGAAEVGRMAEDFGRVIDLP
TGSARKAEPYAKVKAAVETVGALPPLLGLAERFAEEKRRRGFVEYSDQVALALAVCERLP
DVVDDYRRRYRVVLLDEYQDTSVVQTRLLSALFSGEAVMAVGDPHQSIYGWRGASAANLG
RFATDFTGRPRGADEYALSTSWRNPTSVLDAANILVAPLGAGSPVRVERLRARPGAVAGE
LACTFGQTVEEEAEAIAAWFAQRLARRDAEGTPPSAAMLCRSIKKIEVFTAALSRHRIPF
HVLGLGGLLEQPVIADLVSALRVMHDPTAGSELIRLLTGARWRVGPKDIAALRRVASWLA
GRDHRFQELEPEVRDRLRRSVAGEESASLVDALDFVVEAPEGHRQLSGFSGSGVERMRAA
GRQLDQLRSRVGLDLLDLVTLVQQELRLDIEVAANETAQLGQASLDAFAEQVASYLASDD
RATLGSFLSWLAEAEKRDNLAPRSEDAEPGTVQILTIHGSKGLEWDVVAVPRLVEGELPG
PPQSRRGWLAFGQLPSEFRGDCAELPVLPWRTVEDQKTLDAAIADFEAENLARHLDEQRR
LVYVAVTRARESLLLTGSYWSTQSRPRGPGAYLRELQGAGLIAGDAFPACDDPEDNPLAP
ASRMVSWPLDPLGARRRSVESAAEAVRSARARGAGEGGVYARDLDLLLAERARRESESGL
VELPARIPASRFKDYVSDPAGAASALRRPMPERPYRQTRLGTLFHRWVEERYGTVAGRVD
ELDATAHELDDPAGEILEAERLADLQATFAASEWALRAPDEVELEIHIALAGQVVVCKLD
AVYRVADGRHDYQIVDWKTGRAPHDASDLDRKQLQLALYRLAFAQHAGIEPERIDAVFYF
VADDTVVRPSRLYSEQELAELWRASVAGR
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccggcgacgacatcctcggcgatctcctcggggtcgagaccgaacagtccggc
ctcgacctggtcgagagcggcttcgcgctctcggagccggagtccgggccggttcgcccg
tgccggagagtctccgccgtcgagatcgcggacgcgctcggcctcccgcgcccgaccggg
cagcagcgggctgtgatcgaggcgccgctgagccccgccatcgtcgtcgccggcgcgggc
agcggcaaaaccgagacgatggcgaatcgcgtggtctggctgctcgcgaacggggaggtc
cgcgtcccggaggtgctcggcctcaccttcacacgcaaggcggctggcgaactcgcggag
cgtgtccggaagcgcatcgagcagttggtcgcttcgggtctgacagatatccagttcgac
ccgttcgaggcgccggacgtggcgacctacaacgcgttcgcgaacgcgatcttccgcgag
aacgcccttctcatcgggcgtgagccggaggcggccgtcctcagcgaggcgtctgcctgg
cagctcgcgcggcgagtggtggtcgacagcgccgatgaccgcctggtcgatctcgaccgg
aacgtggacgctgtcaccgccgccgttctggacctcagccgcgccctcagcgagaacatc
gccggcgcagccgaggtcggacggatggccgaggacttcggccgggtgatcgacctcccc
accggcagcgcccgcaaggcggagccgtacgccaaagtgaaggcggccgtcgagaccgtc
ggcgcgctgccgccgctgctcggcctcgccgaacgcttcgcggaggagaagcgccgccgc
ggtttcgtcgagtactccgaccaggtcgccctcgcgctcgccgtctgcgagcgactgccg
gacgtcgtggacgactaccgccgccgctaccgtgtggtgctgctcgacgaatatcaagac
acgtccgtcgtccagacccgtctgctctccgccctcttctccggggaggctgtgatggcg
gtcggcgatccgcaccagtcgatctacggctggcggggagcgagcgcggcgaacctcggc
cggttcgcgaccgacttcaccgggcgtccccggggggcggacgagtatgcgctcagcacc
agctggcggaacccgacgagtgtgctcgacgcggccaacatcctcgtcgctccgctgggc
gcgggctcacctgtgcgtgtcgagcggctccgggcgcggccgggcgcggtcgccggcgag
ctggcgtgtacgttcgggcagaccgtcgaggaggaggcggaggcgatcgcggcctggttc
gcgcagcggctcgcgcggcgggacgccgagggcacgccgccctcggccgcgatgctctgc
cgctccatcaagaagatcgaagtgttcacggcggcgctgagccggcaccgcattccgttc
cacgtcctcggcctcggcgggctgctggaacagccggtcatcgccgatctcgtcagcgcg
ctgcgcgtgatgcacgacccgacggccggttcggagctgatccgcctgctcaccggtgcg
cgctggcgggtcgggccgaaggacatcgcggcgctccgccgcgtcgcatcgtggctcgcc
ggccgcgaccaccgcttccaggaactcgaacccgaggtgcgcgaccggctgcggcgctcg
gtcgcaggggaggagtcggcctctctcgtcgacgctctcgatttcgtggtggaggctccg
gaggggcaccgtcagctctccgggttcagtgggtccggcgtcgagcggatgcgcgccgcc
ggccgccagctcgaccagctgcgttcccgcgtcggtctcgatctgctcgacctcgtcacc
ctcgtccagcaggaactgcgcctcgacatcgaagtcgccgcaaacgagaccgctcagctg
ggtcaggccagcctcgacgcgttcgccgaacaggtcgcgtcctacctcgccagcgacgac
cgtgcgacgctcggctccttcctctcctggctcgccgaggccgaaaagcgcgacaacctg
gcgccgcgcagcgaggacgcggaacccggaacggtccagatcctcactattcacggctcc
aagggattggagtgggatgtcgtggccgtgccgcgcctggtcgagggcgagctccccggc
ccaccgcagagccggcgcggctggctcgcgttcgggcagctcccgagcgagttccggggc
gactgcgccgaactccccgtgctgccctggcggaccgtcgaggaccagaagaccctcgac
gccgccatcgcggacttcgaggccgagaacctcgcccgccacctggacgagcagcggcgc
ctcgtctacgttgccgtgactcgcgcccgcgagagcctgctcctcaccggctcgtactgg
tcgacgcagtcgcgcccgcgcggcccgggcgcctatctgcgagagctgcagggggccggc
ctcatcgccggggacgcgttcccggcctgcgacgaccccgaggacaacccgctcgccccc
gcttctcggatggtcagctggcccctcgatcccctcggcgcgcgccgccggtccgtcgag
tccgcagccgaagctgtgcgctcggcccgcgcgcggggtgcgggggagggcggagtgtac
gcccgggacctcgatctgctcctcgccgagcgcgcccgccgcgagtccgagtccgggctg
gtggagctgcccgcgcgcattccggcctcccgtttcaaggactacgtcagcgatccggcc
ggggccgcttcggcgttgcgtcgcccgatgccggagcgcccctaccgccagacccgtctc
ggaacgctcttccaccgctgggtcgaggagcgctacggcaccgtcgccgggagggtcgat
gagctcgacgcgactgctcacgaactcgacgatccggccggtgagatcctcgaggccgag
cgcctggccgaccttcaggcgaccttcgccgccagcgagtgggcgctccgggcgccggac
gaggtcgagctggagatccacatcgcgctcgccggtcaggtcgtggtctgcaaactggat
gccgtctaccgggtcgcggacggccgtcacgactaccagatcgtggactggaagaccggc
agggcgcctcatgatgccagcgatctggaccgtaagcagcttcagctggcgctgtaccgc
ctcgcgttcgcgcagcacgcggggatcgagccggagcggatcgacgctgtcttctacttc
gtggcggacgacacggtggtgcggccgtctcggctgtactcggagcaggagctggccgaa
ctgtggcgcgcgtcggtggccggccgctag
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