Leifsonia xyli subsp. cynodontis DSM 46306: O159_12600
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Entry
O159_12600 CDS
T02852
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
lxy
Leifsonia xyli subsp. cynodontis DSM 46306
Pathway
lxy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O159_12600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxy03400
]
O159_12600
DNA repair and recombination proteins [BR:
lxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O159_12600
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Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
HHH_2
UVR
HHH
Motif
Other DBs
NCBI-GeneID:
17048242
NCBI-ProteinID:
AGW41337
UniProt:
U3P8S2
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Position
1197113..1199083
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AA seq
656 aa
AA seq
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MADTVSYRPKAGEIPTQPGVYRFRDKTRRVLYVGKAKNLRARLSNYFQPLRSLHERTRRM
VTTAASVEWTVVGSEFEALQLEYTWIKEYNPPFNVQFRDDKSYPYLAVTLGERIPRVMVT
RNRNTKGARYFGPYMKVWAIRDTVDLMLKAFPVRSCSDGVYRRAELTGRPCLLGDIGKCA
GPCVGRVTPPEHRRLAEDFVSFMAGDDSAYIRDLTEKMKQAAGTMDYEAAARHRDAIQAL
EAAMGKSAVVLQDNVDLDAFGIAHDELAAAVQQFIVRGGRIRGVRSWVVDKELDVELGEL
IETVMQNAYEGADAPPREILVPVLPDDAAELGQWLTARRHENSGGGVSDPSATRGRLSGR
VELKVAQRGDKAALAQTAEMNAKNALVLYKTRRSSDFVARSKALSDIQDALGMEDAPLRI
ECYDVSHLSGTNIVASMVVFEDGLPRKDQYRRFSIPESADDTESIYQVISRRLAYLREEP
SVEVLPPENGDDPGTGVDAEAAEAAERRRKKFAYPPNLLIVDGGQPQVAAARRALEESGV
SGVQLAGIAKRLEEVWLPGSDFPVILPRNSDALFLIQRIRDEAHRFAIAYQRARRKRDIT
TVLGEIPGLGPARVKELLKHFGSVAQLRRAAPEEIAEVRGVGPRLAAAVFERLADR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacaccgtcagctaccggcccaaggccggcgagatcccgacccagccgggcgtg
taccgcttccgtgacaagacgcgccgcgtgctctacgtcggcaaggcgaagaatctgcgc
gcgcggctgagcaactacttccagcccctgcgcagcctgcacgagcgcacccggcgcatg
gtcacgaccgccgcgagcgtcgagtggaccgtcgtgggcagcgagttcgaggcgttgcag
ctggagtacacctggatcaaggagtacaacccgccgttcaacgtgcagttccgggacgac
aaatcgtatccgtatctggcggtgacgctcggcgagcgcatcccacgggtcatggtgacg
cgcaaccggaacacgaagggcgcgcgctacttcggcccgtacatgaaggtgtgggccatc
cgcgatacggtggacctcatgctcaaggcgttcccggtccgcagctgctcggacggcgtg
taccgccgagcggagctcaccggccggccctgcctgctcggagacatcggcaagtgtgcc
ggcccctgcgtgggccgggtgacgcccccggagcatcggaggctggccgaggacttcgtc
tccttcatggcgggcgacgacagcgcatacatccgcgacctgacggagaagatgaagcag
gcagcgggcacgatggactacgaggcggccgcgcggcatcgcgacgcgatccaggcgttg
gaggccgcgatgggcaaaagcgccgtcgtgctccaggacaacgtcgacctcgacgctttc
ggcatcgcccacgacgagctcgccgcggccgtgcagcagttcatcgtccgtggcgggcgc
atccgcggtgtgcgcagctgggtggtcgacaaggaactggatgtcgaactcggcgagctg
atcgagaccgtcatgcagaacgcctacgagggggcggatgcgccgccgcgggagatcctg
gtgccggttctcccggacgatgccgccgagctggggcagtggctcaccgcccgccggcac
gagaacagcggcggcggtgtcagcgacccgtcggcgacccgcggccggctgagcgggcgg
gtcgagctcaaggtggcccagcgcggcgacaaggccgccctcgcgcagaccgcggagatg
aacgcgaagaacgctcttgtcctctacaagacccgccgcagctccgacttcgtcgcgcgg
tcgaaggcgctcagcgacatccaggacgccctcgggatggaggacgctccgctccgcata
gagtgctacgacgtctcccacctgagcggaacgaacatcgtggcgtcgatggtcgtgttc
gaggacgggctcccgcgcaaagatcagtaccgccggttcagcatccccgagtcggccgac
gacaccgaatccatctaccaggtgatctcccggcggctggcgtacctgcgcgaggagccg
tccgtcgaggtgctccccccggagaacggcgacgacccggggaccggcgtggacgcggag
gccgccgaggccgcggagaggcgtcgcaagaagttcgcgtacccgccgaacctcctcatc
gtcgacggcggccagccgcaggtggccgccgcccgccgggcgctggaggagtccggtgtg
tccggcgtccagctggccgggatcgccaaacgcctggaggaggtctggctgcccggctcg
gacttccccgtcatcctgccccgcaacagcgacgcgctgttcctcatccagcgcatccgc
gacgaagcgcaccggttcgcgatcgcctaccagcgcgcccggcggaagcgcgatatcacg
accgtgctgggggagatcccggggctcggccccgcgcgcgtgaaggagctgctgaagcat
ttcggttcggtcgcacagctgaggcgggcggcgcccgaggagatcgccgaggtgcgcggg
gtcggccccaggctcgcggcggcggtgttcgagcggctcgcggaccgctga
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