Lysobacter alkalisoli: FKV23_00020
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Entry
FKV23_00020 CDS
T06167
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lyj
Lysobacter alkalisoli
Brite
KEGG Orthology (KO) [BR:
lyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyj03032
]
FKV23_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
lyj03400
]
FKV23_00020 (gyrB)
Enzymes [BR:
lyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FKV23_00020 (gyrB)
DNA replication proteins [BR:
lyj03032
]
Prokaryotic type
DNA Topoisomerases
FKV23_00020 (gyrB)
DNA repair and recombination proteins [BR:
lyj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FKV23_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDH68679
UniProt:
A0A514BNR5
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Position
4680..7181
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AA seq
833 aa
AA seq
DB search
MTPSEHDPKSESVQDPATSSADQAPQQAYDSSRITVLRGLEAVRKRPGMYIGDVHDGTGL
HHMVFEVVDNSVDEALAGHADDIIVIIHDDGSVSVSDNGRGVPVDIHKEEGRSAAEVILT
VLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEHLWLDIWRDGHHYQQEYALGEPLYPLKQ
LEATDKRGTTLRFKPAADIFTDTEFHYDILAKRLRELSFLNSGVKITLVDERASQSGGEG
KRDVFQYEGGIRSFVEHLAQLKTPLHPNVISVTGEMNDITVDVAIQWTDAYQETMFCFTN
NIPQKDGGTHLIGFRAALTRTLSNYIEQNGIAKQAKVNLSGDDMREGMIAVLSVKVPDPS
FSSQTKEKLVSSDVRPVVESTFGARLEEFLQEHPQEARAICEKVVDAARAREAARKARDL
TRRKGALDIAGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRRTQAILPLKGKIL
NVERARFDRMLGSAEVGTLITALGTGIGKDEYNPDKLRYHRIILMTDADVDGSHIRTLLL
TFFYRQMPELIERGHIYIGLPPLYKIKQGKTELYLKDDAALDAYLANHAVENASLMPAEG
EPPITGSALEKLLLVYASAREVIARNGHRFDPRVLEALIDFTPLDSAHLTENTDERAELD
ALAARLNRTGLGQPRYSLDMQAATDGHPAALIIERSHMGQTLTQVLPLAAFEGGELRPLR
EAADHLHGLIREGAKIIRGNREQPIASFAQAQAWLMDEAKKGRQIQRFKGLGEMNPEQLW
ETTVNPETRRLLQVRIEDAVAADQIFSTLMGDVVDPRRAFIEDNALKVANLDI
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatccgagcacgaccccaagtccgagtccgtccaggaccccgccacctcatcc
gccgatcaggccccccagcaagcctacgattccagccgcatcaccgtgctgcgtggcctg
gaagccgtgcgcaagcgcccgggcatgtacattggcgacgtccacgatggcaccggcctg
caccacatggtgttcgaggtggtcgataactcggtcgacgaggccctggccggccatgcc
gacgacatcatcgtcatcatccacgacgacggttcggtctcggtgtcggacaacggccgc
ggcgtgccggtcgacatccacaaggaagaaggccgctcggcggcggaagtcatcctcacc
gtcctccatgccggcggcaagttcgacgacaacagctacaaggtttccggcggcctgcat
ggcgttggcgtctcggtggtcaatgccctgtccgagcacctgtggctggacatctggcgc
gatggccaccactaccagcaggaatacgcgctcggcgagccgctgtatccgctcaagcag
ctggaggcgaccgacaagcgcggcaccaccctgcgcttcaagccggcggcggatatcttc
accgacaccgaattccactacgacattctcgccaaacgcctgcgcgagttgtcgttcctg
aactcgggggtcaagatcaccctcgtcgacgagcgtgcgtcccagagcgggggcgagggc
aagcgcgacgtattccagtacgagggcggcatccgctctttcgtcgaacatctggcccag
ctcaagaccccgctgcacccgaatgtcatctcagttacaggtgagatgaacgacatcacg
gtcgacgtcgcgatccagtggaccgacgcctaccaggaaacgatgttctgcttcaccaac
aacatcccgcagaaggacggcggcacccacctgatcggcttccgcgccgcccttacccgc
accctgtccaattacatcgaacagaacgggatcgccaaacaggccaaggtcaacttgtcg
ggcgacgacatgcgtgaaggcatgatcgcggtgctgtcggtcaaggtgccggatccgagc
ttttcgtcgcagaccaaggaaaaactggtcagttcggacgtcaggccggtcgttgagagc
acgttcggtgcacgtttggaggagttcctccaggaacacccccaggaggcccgcgccatc
tgcgaaaaggtggtcgatgccgcgcgtgcccgcgaggccgcgcgcaaggcccgcgacctg
acccggcgcaagggcgcgctcgacatcgccggcctgccaggcaagctggccgactgtcag
gaaaaggatccggccctgtccgagctgttcatcgtcgagggcgactccgccggcggctcg
gccaagcagggacgcaaccgccgtacccaggcgatcctgccgctcaagggcaagattctc
aacgtcgagcgcgcacgcttcgaccgcatgctgggttcggccgaggtcggcaccctgatc
accgccctgggcaccggtatcggcaaggacgaatacaacccggacaagctgcgctaccac
cgcatcattctgatgaccgacgccgacgtcgacggcagccacatccgtaccctgctgctg
accttcttctaccggcagatgccggagctgatcgagcgcggccacatctacatcggcctg
ccgccgttgtacaagatcaagcagggcaagaccgagctgtacctgaaggacgacgcggcg
ctcgacgcctacctcgccaaccacgcggtcgagaacgccagcctgatgccggccgagggc
gaaccgccgatcaccggatcggcgttggagaaattgctgctcgtctacgcctcggcccgc
gaggtgatcgcccgcaacggtcatcgtttcgacccgcgcgtgctggaagcgctgatcgac
ttcacccccctcgacagcgcccatctgaccgagaacaccgacgagcgtgccgagctcgac
gcactggctgcccgtctcaaccgcaccggtctcggccagccgcgctattccctggacatg
caggcggccaccgatggccatcccgccgccctgatcatcgaacgcagccacatgggtcag
accctgacccaggtactgccgttggctgcattcgaaggcggcgaactgcgccccttgcgc
gaggctgccgaccacttgcatggcctgatccgcgaaggcgcgaagatcatccgcggcaat
cgcgaacagccgatagccagcttcgcccaggcccaggcctggctgatggacgaggccaag
aagggtcgccagatccagcgcttcaagggcctgggcgagatgaaccccgagcagttgtgg
gaaaccacggtcaatcctgagacccgccgcctgttgcaggtgcggatcgaggacgcggtc
gccgccgaccagatcttcagtaccctgatgggcgacgtggtcgatccgcgccgcgccttc
atcgaggacaacgcgctgaaggtggccaacctcgacatctga
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