Lysinibacillus sp. YS11: LBYS11_09290
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Entry
LBYS11_09290 CDS
T05299
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00860
Porphyrin metabolism
lys01100
Metabolic pathways
lys01240
Biosynthesis of cofactors
Module
lys_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LBYS11_09290 (cobD)
Enzymes [BR:
lys01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
LBYS11_09290 (cobD)
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Motif
Pfam:
CobD_Cbib
DUF2142
Motif
Other DBs
NCBI-ProteinID:
AUS86517
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Position
1927801..1928757
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AA seq
318 aa
AA seq
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MIAIVIACIIGLIFDLVVGDPPKLPHPVRWIGHLIQSQTALWNKGKWRKLRGTVMALAVV
GTTMFVVTLILLLSYQVSIIFGILVEGLLIGIGLAQRSLKEAAMAVYEPLVKGDFAEARV
KLSWIVGRDTDKLGEDEIVRGVVETVSENTSDGVTAPLFYAFLFGAIGLWGYKAVNTLDS
MVGYKNEKYKDFGMFSAKLDDVLNFIPSRITGLLIVLGTKNETDRSLGKRLKRWVQDAKK
HPSPNSGYLEAATAVQLGVQLGGKNTYQGVVSHRAIMGEKLVPLTKEHIATSIIHMRIAT
VLFALVMLAVEVLIYAVT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattgctatcgtgattgcctgcatcatagggcttatttttgatttagtagtaggggac
cctccgaagcttcctcatcctgtacgctggattggacacttgattcaatcgcaaacagct
ttatggaataagggcaaatggcgcaagctacgtgggacagtgatggcacttgctgttgtt
ggcacgaccatgtttgtggtgacgctaattctattactaagctatcaggtgagtatcatt
tttggcatccttgtagagggtctgctgattggtatcggactggcacagcggagcttgaag
gaggcggcgatggctgtctatgagccgcttgtcaaaggggattttgccgaagcacgagtt
aagctatcttggattgtcggacgtgataccgataaactaggtgaggatgaaattgtgcgt
ggtgtggtagaaacggtttctgagaatacaagtgatggtgtgacagctccactcttttat
gcctttctatttggggcaattggtttatggggctataaggctgtcaataccttagattcg
atggtgggctataaaaatgaaaaatataaagactttggtatgttttcagccaagcttgat
gatgtcctgaattttattccaagtcgcattacaggcttactgatcgtgcttggtacgaaa
aatgaaacagatcgttcgcttggcaagcgcttaaagcgttgggtacaggacgctaagaag
catcctagtccaaatagtggctatttagaggcagcgactgcagtgcagcttggtgtacag
ctaggagggaaaaatacgtatcagggcgttgtctctcatcgagcaattatgggggaaaaa
ttagtgccattaacgaaagagcatattgcaacgtccattattcatatgcgtattgccaca
gtgctgtttgcgcttgttatgttagcagtggaggtgttaatttatgcggttacctaa
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