Lysinibacillus sp. YS11: LBYS11_16600
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Entry
LBYS11_16600 CDS
T05299
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00020
Citrate cycle (TCA cycle)
lys00190
Oxidative phosphorylation
lys00650
Butanoate metabolism
lys01100
Metabolic pathways
lys01110
Biosynthesis of secondary metabolites
lys01120
Microbial metabolism in diverse environments
lys01200
Carbon metabolism
Module
lys_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lys_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LBYS11_16600
00650 Butanoate metabolism
LBYS11_16600
09102 Energy metabolism
00190 Oxidative phosphorylation
LBYS11_16600
Enzymes [BR:
lys01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LBYS11_16600
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
FAD_oxidored
Phage_int_SAM_1
NAD_binding_8
ERM_C
Motif
Other DBs
NCBI-ProteinID:
AUS87853
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Position
complement(3311354..3313108)
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AA seq
584 aa
AA seq
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MAKSKIIVVGGGLAGLMATIKAAEVGTEVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWIHFDDTVYGGDFLANQPPVKGMCDAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTL
MHRTAFSGATTGQQLLYALDEQVRSHEVAGLVNKYEHWEFLGVIIDEDGVCRGIVAQDMR
TEEIKSFRADAVIMATGGPGIIFGKTTNSVINTGSAASIVYQQGASYANGEFIQIHPTAI
PGDDKNRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFVGDDPRKLPMKIFPAVHYSMGGLWV
DYNQMTEIPGLFAAGECDYSQHGANRLGANSLLSAIYGGMVAGPNAVDYVKHLKKHAEDL
PQEIYDARVKEEQAKWDAIMKMEGTENAYLLHKELGEMMTATMTVVRYNDQLEDTLKKLD
ELTERWNNININDTQKWSNQGAHFTRQLKNMLVLAKVMTKGALLRNESRGAHYKPDFPNR
DDENFLKTTMAKFDPATGNPIITYQEVDVSLIPPRKRDYSAKGD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcaaaataattgttgtcggcggtggtcttgccggtctgatggcaacgatt
aaagcagctgaagttggtactgaagttgatttattctcattagttcctgtaaaacgctca
cactctgtttgtgcgcaaggcggaattaatggtgcggtaaatactaaaggtgaaggggat
tctccatggatccactttgatgatacagtttatggtggggacttcctagcgaaccaacca
ccagttaaaggtatgtgtgatgcagcacctggcattatccacttgatggaccgtatgggt
gttatgttcaaccgtacaccagaaggacttttagatttccgtcgttttggtggtacttta
atgcaccgtacagctttctctggtgcaacaacaggtcaacaattactatatgcgctagat
gagcaagttcgttctcatgaagtagctggtttagtaaataaatatgaacactgggaattc
cttggtgttattatcgatgaagacggcgtttgtcgtggtatcgtagcgcaagatatgcgt
acagaagaaattaaatcattccgtgcagacgctgttattatggcgactggtggccctggt
attatcttcggtaaaacaacaaactctgttattaacacaggttctgctgcttctatcgtt
tatcaacaaggtgcttcatatgcgaatggtgaattcattcaaattcacccaacagcgatt
cctggagatgacaaaaaccgtctaatgtcagaatcagctcgtggtgaaggtggtcgtatt
tggacttataaagacggtaaaccttggtacttcttagaagagaaatacccagcttatggt
aacttagtaccacgtgatattgcgacacgtgaaattttcgacgtttgtgtaaaccaaaaa
cttggtatcaatggcgaaaacatggtatacctagatctttcacataaagatccacatgaa
ttggacgttaaacttggtggtatcatcgaaatctacgaaaaattcgtaggggatgaccca
cgtaaattaccaatgaaaattttcccagcagttcattattcaatgggtggattatgggtt
gactacaatcaaatgactgaaattcctggtctatttgcagcaggtgaatgtgattactct
caacatggtgcaaaccgtcttggtgcaaactcattattatctgctatctacggtggtatg
gttgcaggaccaaacgcagtagactatgtaaaacaccttaaaaagcatgctgaagatctt
ccacaagagatttacgatgctcgtgtaaaagaggaacaagcgaaatgggatgctatcatg
aaaatggaaggcacagaaaacgcttacttactgcataaagagcttggtgaaatgatgact
gctacaatgactgtagtacgttacaatgatcagcttgaagatacattgaaaaaacttgat
gagcttactgagcgttggaacaacatcaacatcaatgatacgcaaaaatggagcaatcaa
ggcgcacactttacacgtcagcttaaaaatatgttagtgcttgcaaaagtaatgacaaaa
ggtgcactattacgtaatgaatctcgtggtgcacactataaacctgatttccctaaccgt
gatgatgagaacttcttaaaaacaacaatggcgaagtttgacccagctactggtaatcca
atcatcacgtaccaagaagtcgacgtttcattaatcccaccacgtaaacgcgactactct
gcgaaaggagactaa
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