Lysobacter sp. TY2-98: DWG18_09160
Help
Entry
DWG18_09160 CDS
T05586
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lyt
Lysobacter sp. TY2-98
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lyt03016
]
DWG18_09160
Enzymes [BR:
lyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DWG18_09160
Transfer RNA biogenesis [BR:
lyt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DWG18_09160
Prokaryotic type
DWG18_09160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AXK72421
UniProt:
A0A345ZKZ6
LinkDB
All DBs
Position
complement(1904555..1905595)
Genome browser
AA seq
346 aa
AA seq
DB search
MSTALPQAHGAPVLTATFRTQQDDFIVEEIPGFEPTGSGEHLLLEIEKRGQNTAFVARRI
AEWAGVKEVAIGYAGLKDRHAVTRQRFTVHLPGRESPDVSALEDASLRVLSSTRHARKLP
RGALAGNRFTITLRDVDGDRTAIEARLSRISKRGVPNYFGEQRFGRAGDNVAQALAMFAG
RRVRREERSLLLSAARSELFNRVLAERVRTGSWDGALDGEVWMLDGRRSVFGPESFDDAL
AARLAAFDIHPTGPLWGRGELRTTGACRELERACVDADNGPALQQGLERAGLEQERRALR
LRPDAMGWRWPAEYTLELRFSLPPGAYATCVLDALGDVTSAAGRSV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcacttccgcaggcgcatggcgcgcccgtactgacggcgacgttccgcacg
cagcaggacgatttcatcgtcgaagagatcccgggcttcgaaccgacgggcagcggcgag
cacctgctgctcgagatcgagaagcgcgggcagaacaccgccttcgtcgcacgtcgcatc
gccgagtgggcaggcgtcaaggaagtcgcgatcggttacgccgggctcaaggatcggcat
gcggtgacgcgacagcgattcaccgtgcatctgccgggacgcgaatcgccggacgtctct
gctctcgaggacgcatcgctgcgcgtgctgtcgtcgacgcggcatgcgcgcaaactgccg
cgcggtgcgctggccggcaatcgcttcacgatcacgctgcgcgatgtcgatggcgaccgc
acggcgatcgaagcgcgcctgtcccgcatctctaaacgcggcgtgcccaactatttcggc
gagcagcgattcggccgcgcgggcgacaacgtcgcgcaggcactggcgatgttcgccgga
cggcgcgtgcgccgcgaggagcgcagcctgctgctctccgcggcgcgctccgaactcttc
aaccgcgtactggccgagcgcgtgcgcacgggatcgtgggatggcgcactcgacggcgag
gtctggatgctcgatggccgtcgcagcgtgttcggacccgaatcgttcgacgatgcactc
gctgcgcggctggctgcgttcgatatccatccgaccggaccgctgtggggacgcggtgag
ttgcgcacgaccggcgcatgccgcgagctcgaacgcgcctgcgtcgacgccgacaacggc
ccggccctgcagcagggattggagcgcgcgggcctcgagcaggagcgtcgcgcactgcgc
ctgcggcccgatgcaatgggctggcgctggccggccgaatacacgctggaattgcgtttc
agcctaccgccgggcgcctacgccacctgcgttctggatgccctgggcgacgtcacgtcg
gcagccggtcgctccgtctga
DBGET
integrated database retrieval system
